* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘PopGenReport’ ...
** this is package ‘PopGenReport’ version ‘3.1’
** package ‘PopGenReport’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘PopGenReport’
    finding HTML links ... done
    addline                                 html  
    addpoly                                 html  
    allel.rich                              html  
Rd warning: allel.rich.Rd:10: missing link ‘genind’
    allele.dist                             html  
Rd warning: allele.dist.Rd:10: missing link ‘genind’
    bilby                                   html  
Rd warning: bilby.Rd:14: missing link ‘genind’
    costdistances                           html  
    emigration                              html  
    gd.kosman                               html  
Rd warning: gd.kosman.Rd:10: missing link ‘genind’
    gd.smouse                               html  
Rd warning: gd.smouse.Rd:10: missing link ‘genind’
    genleastcost                            html  
Rd warning: genleastcost.Rd:34: missing link ‘gdistance’
Rd warning: genleastcost.Rd:44: missing link ‘rSPDistance’
    init.popgensim                          html  
    landgen                                 html  
    landgenreport                           html  
Rd warning: landgenreport.Rd:52: missing link ‘gdistance’
Rd warning: landgenreport.Rd:61: missing link ‘rSPDistance’
    lgrMMRR                                 html  
    mutation                                html  
    null.all                                html  
Rd warning: null.all.Rd:10: missing link ‘genind’
    opt.landgen                             html  
    p2p                                     html  
    pairwise.fstb                           html  
    pairwise.propShared                     html  
    popgenreport                            html  
Rd warning: popgenreport.Rd:6: missing link ‘genind’
Rd warning: popgenreport.Rd:167: missing link ‘genind’
Rd warning: popgenreport.Rd:169: missing link ‘import2genind’
Rd warning: popgenreport.Rd:170: missing link ‘df2genind’
Rd warning: popgenreport.Rd:170: missing link ‘read.fstat’
Rd warning: popgenreport.Rd:171: missing link ‘read.structure’
Rd warning: popgenreport.Rd:171: missing link ‘read.genetix’
Rd warning: popgenreport.Rd:172: missing link ‘read.genepop’
Rd warning: popgenreport.Rd:187: missing link ‘Mercator’
Rd warning: popgenreport.Rd:188: missing link ‘dismo’
Rd warning: popgenreport.Rd:43: missing link ‘genind’
Rd warning: popgenreport.Rd:144: missing link ‘knitr’
Rd warning: popgenreport.Rd:230: missing link ‘adegenet’
Rd warning: popgenreport.Rd:230: missing link ‘pegas’
Rd warning: popgenreport.Rd:230: missing link ‘mmod’
    pops2genind                             html  
    possums                                 html  
    read.genetable                          html  
Rd warning: read.genetable.Rd:5: missing link ‘genind-class’
Rd warning: read.genetable.Rd:77: missing link ‘adegenet’
Rd warning: read.genetable.Rd:131: missing link ‘import2genind’
Rd warning: read.genetable.Rd:131: missing link ‘df2genind’
Rd warning: read.genetable.Rd:132: missing link ‘read.fstat’
Rd warning: read.genetable.Rd:132: missing link ‘read.structure’
Rd warning: read.genetable.Rd:133: missing link ‘read.genetix’
Rd warning: read.genetable.Rd:133: missing link ‘read.genepop’
    reproduction                            html  
    run.popgensim                           html  
    spautocor                               html  
    wassermann                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (PopGenReport)