* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘PeakSegDP’ ...
** this is package ‘PeakSegDP’ version ‘2024.1.24’
** package ‘PeakSegDP’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpTZgtuf/R.INSTALLdf7574327dc3/PeakSegDP/src'
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c cDPA.c -o cDPA.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c interface.c -o interface.o
gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o PeakSegDP.so cDPA.o interface.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpTZgtuf/R.INSTALLdf7574327dc3/PeakSegDP/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpTZgtuf/R.INSTALLdf7574327dc3/PeakSegDP/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpTZgtuf/R.INSTALLdf7574327dc3/PeakSegDP/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-PeakSegDP/00new/PeakSegDP/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘PeakSegDP’
    finding HTML links ... done
    GeomTallRect                            html  
    H3K36me3.AM.immune.19                   html  
    H3K36me3.TDH.other.chunk3.cluster4      html  
    H3K4me3.TDH.immune.chunk12.cluster4     html  
    PeakSegDP                               html  
    PoissonLoss                             html  
    cDPA                                    html  
    calc.grad.list                          html  
    calc.loss.from.lp.list                  html  
    calc.loss.list                          html  
    chr11ChIPseq                            html  
    chr11first                              html  
    derivs                                  html  
    getPath                                 html  
    phi.list                                html  
    regression.funs                         html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (PeakSegDP)