* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘PatientProfiles’ ... ** package ‘PatientProfiles’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘PatientProfiles’ finding HTML links ... done PatientProfiles-package html addAge html addCategories html addCdmName html addCohortIntersect html addCohortIntersectCount html addCohortIntersectDate html addCohortIntersectDays html addCohortIntersectFlag html addCohortName html addConceptIntersect html addConceptIntersectCount html addConceptIntersectDate html addConceptIntersectDays html addConceptIntersectFlag html addDateOfBirth html addDeathDate html addDeathDays html addDeathFlag html addDemographics html addFutureObservation html addInObservation html addIntersect html addLargeScaleCharacteristics html addPriorObservation html addSex html addTableIntersect html addTableIntersectCount html addTableIntersectDate html addTableIntersectDays html addTableIntersectField html addTableIntersectFlag html assertNameStyle html availableEstimates html availableFunctions html endDateColumn html formatCharacteristics html gtCharacteristics html gtResult html mockPatientProfiles html optionsTableCharacteristics html optionsTableCohortOverlap html optionsTableCohortTiming html pipe html plotCharacteristics html plotCohortIntersect html plotCohortOverlap html plotCohortTiming html plotDemographics html plotLargeScaleCharacteristics html plotTableIntersect html reexports html sourceConceptIdColumn html standardConceptIdColumn html startDateColumn html summariseCharacteristics html summariseCohortCounts html summariseCohortIntersect html summariseCohortOverlap html summariseCohortTiming html summariseConceptIntersect html summariseDemographics html summariseLargeScaleCharacteristics html summariseResult html summariseTableIntersect html tableCharacteristics html tableCohortIntersect html tableCohortOverlap html tableCohortTiming html tableDemographics html tableLargeScaleCharacteristics html tableTableIntersect html variableTypes html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘PatientProfiles’ as ‘PatientProfiles_0.8.0_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (PatientProfiles)