* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘PMAPscore’ ...
** this is package ‘PMAPscore’ version ‘0.1.1’
** package ‘PMAPscore’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘PMAPscore’
    finding HTML links ... done
    final_signature                         html  
    gene_Ucox                               html  
    gene_Ucox_res                           html  
    gene_symbol_Entrez                      html  
    get_Entrez_ID                           html  
    get_MultivariateCox_result              html  
    get_Oncoplots                           html  
    get_final_signature                     html  
    get_km_survival_curve                   html  
    get_mut_status                          html  
    get_pfs_score                           html  
    get_response_plot                       html  
    get_risk_score                          html  
    get_roc_curve                           html  
    get_sam_cla                             html  
    get_univarCox_result                    html  
    km_data                                 html  
    maf_data                                html  
    maffile                                 html  
    mut_num                                 html  
    mut_sam                                 html  
    mut_sample                              html  
    mut_status                              html  
    newspia                                 html  
    path_Ucox_mul                           html  
    path_Ucox_mul_res                       html  
    path_cox_data                           html  
    path_gene                               html  
    pfs_score                               html  
    response                                html  
    roc_data                                html  
    sig                                     html  
    sur                                     html  
    symbol_Entrez                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (PMAPscore)