* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘PFIM’ ... ** this is package ‘PFIM’ version ‘7.0’ ** package ‘PFIM’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘PFIM’ finding HTML links ... done Administration html AdministrationConstraints html Arm html BayesianFim html Combined1 html Constant html Dcriterion html Design html Distribution html Evaluation html FedorovWynnAlgorithm html FedorovWynnAlgorithm_Rcpp html Fim html IndividualFim html LibraryOfModels html LibraryOfPDModels html LibraryOfPKModels html Linear2BolusSingleDose_ClQV1V2 html Linear2BolusSingleDose_kk12k21V html Linear2BolusSteadyState_ClQV1V2tau html Linear2BolusSteadyState_kk12k21Vtau html Linear2FirstOrderSingleDose_kaClQV1V2 html Linear2FirstOrderSingleDose_kakk12k21V html Linear2FirstOrderSteadyState_kaClQV1V2tau html Linear2FirstOrderSteadyState_kakk12k21Vtau html Linear2InfusionSingleDose_ClQV1V2 html Linear2InfusionSingleDose_kk12k21V html Linear2InfusionSteadyState_ClQV1V2tau html Linear2InfusionSteadyState_kk12k21Vtau html LogNormal html Model html ModelAnalytic html ModelAnalyticInfusion html ModelAnalyticInfusionSteadyState html ModelAnalyticSteadyState html ModelError html ModelInfusion html ModelODE html ModelODEBolus html ModelODEDoseInEquations html ModelODEDoseNotInEquations html ModelODEInfusion html ModelODEInfusionDoseInEquation html ModelParameter html MultiplicativeAlgorithm html MultiplicativeAlgorithm_Rcpp html Normal html Optimization html PFIM-package html PFIMProject html PGBOAlgorithm html PSOAlgorithm html PopulationFim html Proportional html Report html SamplingTimeConstraints html SamplingTimes html SimplexAlgorithm html adjustGradient html armAdministration html checkSamplingTimeConstraintsForMetaheuristic html checkValiditySamplingConstraint html computeVMat html constraintsTableForReport html convertPKModelAnalyticToPKModelODE html defineFim html defineModelAdministration html defineModelEquationsFromLibraryOfModel html defineModelType html defineModelWrapper html defineOptimizationAlgorithm html definePKModel html definePKPDModel html evaluateArm html evaluateDesign html evaluateErrorModelDerivatives html evaluateFim html evaluateInitialConditions html evaluateModel html evaluateModelGradient html evaluateModelVariance html evaluateVarianceFIM html finiteDifferenceHessian html fisherSimplex html fun.amoeba html generateDosesCombination html generateFimsFromConstraints html generateReportEvaluation html generateReportOptimization html generateSamplingTimesCombination html generateSamplingsFromSamplingConstraints html getArmConstraints html getArmData html getCorrelationMatrix html getDcriterion html getDeterminant html getFim html getFisherMatrix html getListLastName html getModelErrorData html getModelParametersData html getRSE html getSE html getSamplingData html getShrinkage html optimizeDesign html plotEvaluation html plotEvaluationResults html plotEvaluationSI html plotFrequencies html plotFrequenciesFedorovWynnAlgorithm html plotRSE html plotRSEFIM html plotSE html plotSEFIM html plotSensitivityIndices html plotShrinkage html plotWeights html plotWeightsMultiplicativeAlgorithm html processArmEvaluationResults html processArmEvaluationSI html replaceVariablesLibraryOfModels html run html setEvaluationFim html setOptimalArms html setSamplingConstraintForOptimization html show html showFIM html tablesForReport html updateSamplingTimes html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PFIM)