* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘PBSmapping’ ...
** package ‘PBSmapping’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/Rtmpid26uP/R.INSTALL3a35ff157ca508/PBSmapping/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c PBSmapping.c -o PBSmapping.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c clipper.cpp -o clipper.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c clipperWrapper.cpp -o clipperWrapper.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c convGSHHS.c -o convGSHHS.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c conversions.c -o conversions.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gshhs.c -o gshhs.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c polygons.c -o polygons.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c thin.c -o thin.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o PBSmapping.so PBSmapping.o clipper.o clipperWrapper.o convGSHHS.o conversions.o gshhs.o init.o polygons.o thin.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpid26uP/R.INSTALL3a35ff157ca508/PBSmapping/src'
make[1]: Entering directory '/tmp/Rtmpid26uP/R.INSTALL3a35ff157ca508/PBSmapping/src'
make[1]: Leaving directory '/tmp/Rtmpid26uP/R.INSTALL3a35ff157ca508/PBSmapping/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-PBSmapping/00new/PBSmapping/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘PBSmapping’
finding HTML links ... done
EventData html
LocationSet html
PBSmapping html
PBSprint html
PolyData html
PolySet html
RGB2RYB html
addBubbles html
addCompass html
addLabels html
addLines html
addPoints html
addPolys html
addStipples html
appendPolys html
bcBathymetry html
calcArea html
calcCentroid html
calcConvexHull html
calcGCdist html
calcLength html
calcMidRange html
calcSummary html
calcVoronoi html
clipLines html
clipPolys html
closePolys html
combineEvents html
combinePolys html
convCP html
convDP html
convLP html
convUL html
dividePolys html
dot-PBSfigs html
dot-PBSmapEnv html
dot-is.in html
extractPolyData html
findCells html
findPolys html
fixBound html
fixPOS html
importEvents html
importGSHHS html
importLocs html
importPolys html
isConvex html
isIntersecting html
joinPolys html
locateEvents html
locatePolys html
makeGrid html
makeProps html
makeTopography html
nepacLL html
placeHoles html
plotLines html
plotMap html
plotPoints html
plotPolys html
print html
pythagoras html
refocusWorld html
rotatePolys html
summary html
surveyData html
thickenPolys html
thinPolys html
towData html
towTracks html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (PBSmapping)