* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘OlinkAnalyze’ ...
** this is package ‘OlinkAnalyze’ version ‘5.0.0’
** package ‘OlinkAnalyze’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘OlinkAnalyze’
finding HTML links ... done
ansi_collapse_quot html
assign_subject2plate html
check_checksum html
check_col_key html
check_columns html
check_darid html
check_file_exists html
check_file_extension html
check_ht_fixed_lod_version html
check_is_arrow_object html
check_is_boolean html
check_is_character html
check_is_dataset html
check_is_integer html
check_is_list html
check_is_numeric html
check_is_scalar_boolean html
check_is_scalar_character html
check_is_scalar_integer html
check_is_scalar_numeric html
check_is_tibble html
check_library_installed html
check_log_colname html
check_npx html
check_npx_all_na_assays html
check_npx_all_na_sample html
check_npx_col_class html
check_npx_col_names html
check_npx_duplicate_sample_ids html
check_npx_nonunique_uniprot html
check_npx_olinkid html
check_npx_qcwarn_assays html
check_npx_update_col_names html
check_olink_broader_platform html
check_olink_data_type html
check_olink_platform html
check_olink_quant_type html
check_osi html
check_out_df_arg html
clean_assay_na html
clean_assay_type html
clean_assay_warning html
clean_col_class html
clean_control_sample_id html
clean_duplicate_sample_id html
clean_invalid_oid html
clean_nonunique_uniprot html
clean_npx html
clean_qc_warning html
clean_sample_type html
convert_read_npx_output html
dot-check_params html
dot-downstream_fun_args html
dot-get_olink_data_details html
dot-read_npx_args html
generate_plate_holder html
get_all_olink_broader_platforms html
get_all_olink_data_types html
get_all_olink_platforms html
get_all_olink_quant_types html
get_alt_colnames html
get_checksum_file html
get_df_output_print html
get_field_separator html
get_file_ext html
get_file_ext_summary html
get_file_formats html
get_npx_file html
get_olink_broader_platforms html
get_olink_data_types html
get_olink_platforms html
get_olink_quant_types html
manifest html
mapping_file_id html
norm_internal_adjust html
norm_internal_adjust_not_ref html
norm_internal_adjust_ref html
norm_internal_assay_median html
norm_internal_bridge html
norm_internal_cross_product html
norm_internal_reference_median html
norm_internal_rename_cols html
norm_internal_subset html
norm_internal_update_maxlod html
npx_data1 html
npx_data2 html
olink_anova html
olink_anova_posthoc html
olink_boxplot html
olink_bridge_selector html
olink_bridgeability_plot html
olink_color_discrete html
olink_color_gradient html
olink_display_plate_dist html
olink_display_plate_layout html
olink_dist_plot html
olink_fill_discrete html
olink_fill_gradient html
olink_format_oid_no_overlap html
olink_format_rm_ext_ctrl html
olink_heatmap_plot html
olink_iqr html
olink_lmer html
olink_lmer_plot html
olink_lmer_posthoc html
olink_lod html
olink_median html
olink_median_iqr_outlier html
olink_norm_input_assay_overlap html
olink_norm_input_check html
olink_norm_input_check_df_cols html
olink_norm_input_check_samples html
olink_norm_input_class html
olink_norm_input_clean_assays html
olink_norm_input_cross_product html
olink_norm_input_norm_method html
olink_norm_input_ref_medians html
olink_norm_input_validate html
olink_norm_product_id html
olink_norm_reference_id html
olink_normalization html
olink_normalization_bridge html
olink_normalization_bridgeable html
olink_normalization_format html
olink_normalization_n html
olink_normalization_n_check html
olink_normalization_project_name_check
html
olink_normalization_qs html
olink_normalization_sample_check html
olink_normalization_subset html
olink_one_non_parametric html
olink_one_non_parametric_posthoc html
olink_ordinal_regression html
olink_ordinal_regression_posthoc html
olink_osi_dist_plot html
olink_pal html
olink_pathway_enrichment html
olink_pathway_heatmap html
olink_pathway_visualization html
olink_pca_plot html
olink_plate_randomizer html
olink_qc_plot html
olink_ttest html
olink_umap_plot html
olink_volcano_plot html
olink_wilcox html
pheatmap_annotate_heatmap html
pheatmap_color_heatmap html
pheatmap_extract_ellipsis_arg html
pheatmap_lst_styling html
pheatmap_run html
pheatmap_set_plot_theme html
plot_heatmap_check_inputs html
plot_heatmap_clean_df html
plot_heatmap_df_to_wide html
plot_heatmap_pheatmap_args html
product_to_platesize html
read_npx html
read_npx_delim html
read_npx_delim_long html
read_npx_delim_wide html
read_npx_excel html
read_npx_format html
read_npx_format_colnames html
read_npx_format_get_format html
read_npx_format_get_platform html
read_npx_format_get_quant html
read_npx_format_read html
read_npx_legacy html
read_npx_legacy_check html
read_npx_legacy_help html
read_npx_parquet html
read_npx_wide html
read_npx_wide_bottom html
read_npx_wide_bottom_version html
read_npx_wide_check_top html
read_npx_wide_middle html
read_npx_wide_npxs_version html
read_npx_wide_panel_version html
read_npx_wide_split_row html
read_npx_wide_top html
read_npx_zip html
red_npx_wide_top_mid_long html
remove_all_na_cols html
run_check_npx html
set_plot_theme html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (OlinkAnalyze)