* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘MoBPS’ ...
** this is package ‘MoBPS’ version ‘1.13.1’
** package ‘MoBPS’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘MoBPS’
finding HTML links ... done
OGC html
add.array html
add.combi html
add.diag html
add.diversity html
add.fixed.effects html
add.founder.kinship html
alpha_to_beta html
analyze.bv html
analyze.population html
bit.snps html
bit.storing html
breeding.diploid html
breeding.intern html
breeding.intern1 html
breeding.intern2 html
breeding.intern3 html
breeding.intern4 html
breeding.intern5 html
breeding.intern6 html
breeding.intern7 html
breeding.intern8 html
bv.development html
bv.development.box html
bv.standardization html
calculate.bv html
cattle_chip html
check.parents html
chicken_chip html
clean.up html
codeOriginsR html
combine.traits html
computing.costs html
computing.costs.cohorts html
computing.snps html
computing.snps_single html
creating.diploid html
creating.phenotypic.transform html
creating.trait html
decodeOriginsR html
demiraculix html
derive.loop.elements html
diag.mobps html
edges.fromto html
edit_animal html
effect.estimate.add html
effective.size html
epi html
ex_json html
ex_pop html
exist.cohort html
find.chromo html
find.snpbefore html
founder.simulation html
generation.individual html
get.admixture html
get.age.point html
get.allele.freq html
get.bv html
get.bve html
get.class html
get.cohorts html
get.cohorts.individual html
get.computing.time html
get.creating.type html
get.culling.time html
get.culling.type html
get.cullingtime html
get.database html
get.death.point html
get.dendrogram html
get.dendrogram.heatmap html
get.dendrogram.trait html
get.distance html
get.effect.freq html
get.effective.size html
get.fixed.effects.p html
get.geno html
get.geno.time html
get.genotyped html
get.genotyped.snp html
get.haplo html
get.id html
get.index html
get.infos html
get.is.first html
get.is.last html
get.litter html
get.litter.effect html
get.maf html
get.map html
get.ngen html
get.nindi html
get.npheno html
get.ntrait html
get.pca html
get.pedigree html
get.pedigree.visual html
get.pedigree2 html
get.pedigree3 html
get.pedigree_old html
get.pedmap html
get.pen html
get.pen.effect html
get.pheno html
get.pheno.off html
get.pheno.off.count html
get.pheno.single html
get.pheno.time html
get.phylogenetic.tree html
get.plink html
get.pool html
get.pool.founder html
get.qtl html
get.qtl.effects html
get.qtl.variance html
get.recombi html
get.reliability html
get.selectionbve html
get.selectionindex html
get.sex html
get.size html
get.snapshot html
get.snapshot.single html
get.time.point html
get.trafo.p html
get.trafo.p.single html
get.trait.name html
get.uhat html
get.variance html
get.variance.components html
get.vcf html
group.diff html
inbreeding.emp html
inbreeding.exp html
insert.bv html
insert.bve html
insert.pheno html
insert.pheno.single html
json.simulation html
kinship.development html
kinship.emp html
kinship.emp.fast html
kinship.emp.fast.between html
kinship.exp html
ld.decay html
maize_chip html
matrix.posdef html
merging.cohorts html
merging.trait html
miesenberger.index html
miraculix html
mutation.intro html
new.base.generation html
ogc.mobps html
optimize.cores html
pedigree.matrix html
pedigree.simulation html
pedmap.to.phasedbeaglevcf html
pig_chip html
plot.population html
recalculate.bv html
recalculate.manual html
recombination.function.haldane html
renaming.cohort html
rowMedian html
scaling.relationship html
set.age.point html
set.class html
set.default html
set.mean.pool html
set.time.point html
sheep_chip html
sortd html
ssGBLUP html
summary.population html
vlist html
write.pedigree html
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MoBPS)