* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘MixStable’ ... ** this is package ‘MixStable’ version ‘0.1.0’ ** package ‘MixStable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘MixStable’ finding HTML links ... done CDF html DONNEE_with_serial_interval html Im html Int_Im html Int_Re html L_stable html Max_vrai html N_epanechnikov html N_gaussian html N_uniform html RT html Re html TableS2_serial_interval_mean_ html aic html analyse_stable_distribution html bayesian_mixture_model html bic html build_mcculloch_interpolators html calculate_log_likelihood html clip html compare_em_vs_em_gibbs html compare_estimators_on_simulations html compare_methods_across_configs html compare_methods_with_gibbs html compute_model_metrics html compute_quantile_ratios html compute_serial_interval html cosine_exp_ralpha html cosine_log_weighted_exp_ralpha html ecf_components html ecf_empirical html ecf_estimate_all html ecf_fn html ecf_regression html em_alpha_stable html em_estimate_stable_from_cdf html em_estimate_stable_from_cdf_with_gibbs html em_estimate_stable_kernel_ecf html em_estimate_stable_kernel_ecf_with_gibbs html em_estimate_stable_recursive_ecf html em_estimate_stable_recursive_ecf_with_gibbs html em_estimate_stable_weighted_ols html em_estimate_stable_weighted_ols_with_gibbs html em_estimation_mixture html em_fit_alpha_stable_mixture html em_stable_mixture html empirical_r0 html ensure_positive_scale html est_r0_ml html est_r0_mle html estimate_alpha_gamma html estimate_beta_delta html estimate_mixture_params html estimate_stable_from_cdf html estimate_stable_kernel_ecf html estimate_stable_params html estimate_stable_r html estimate_stable_recursive_ecf html estimate_stable_weighted_ols html eta0 html eta_func html evaluate_estimation_method html evaluate_fit html export_analysis_report html false_position_update html fast_integrate html fit_alpha_stable_mle html fit_mle_mixture html fit_stable_ecf html generate_alpha_stable_mixture html generate_mcculloch_table html generate_mixture_data html generate_synthetic_data html gibbs_sampler html grad_loglik_alpha html grad_loglik_beta html grad_loglik_delta html grad_loglik_omega html integrate_cosine html integrate_cosine_log_weighted html integrate_function html integrate_sine html integrate_sine_log_weighted html integrate_sine_r_weighted html integrate_sine_weighted html kde_bandwidth_plugin html log_likelihood_mixture html mcculloch_lookup_estimate html mcculloch_quantile_init html metropolis_hastings html mixture_stable_pdf html mle_estimate html mock_gibbs_sampling html mock_lookup_alpha_beta html negative_log_likelihood html normalized_grad_alpha html normalized_objective_beta html normalized_objective_delta html normalized_objective_omega html plot_comparison html plot_distributions html plot_effective_reproduction_number html plot_final_mixture_fit html plot_fit_vs_true html plot_fit_vs_true_methods html plot_method_comparison html plot_mixture html plot_mixture_fit html plot_real_mixture_fit html plot_results html plot_trace html plot_vs_normal_stable html qcv_stat html r_stable_pdf html recursive_weight html robust_ecf_regression html robust_mle_estimate html rstable html run_all_estimations html run_estimations_with_gibbs html safe_integrate html simple_em_real html simulate_mixture html sine_exp_ralpha html sine_log_weighted_exp_ralpha html sine_r_weighted_exp_ralpha html sine_weighted_exp_ralpha html skew_kurtosis html stable_fit_init html test_normality html unpack_params html validate_params html wasserstein_distance_mixture html ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MixStable)