• using R version 4.5.1 Patched (2025-06-30 r88369)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.2.0-19) 14.2.0     GNU Fortran (Debian 14.2.0-19) 14.2.0
• running under: Debian GNU/Linux 13 (trixie)
• using session charset: UTF-8
• checking for file ‘MiscMetabar/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘MiscMetabar’ version ‘0.14.3’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘MiscMetabar’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [16s/26s] OK
• checking whether the package can be loaded with stated dependencies ... [15s/25s] OK
• checking whether the package can be unloaded cleanly ... [15s/27s] OK
• checking whether the namespace can be loaded with stated dependencies ... [15s/26s] OK
• checking whether the namespace can be unloaded cleanly ... [17s/20s] OK
• checking loading without being on the library search path ... [16s/17s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [86s/94s] OK
• checking Rd files ... [2s/2s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [8s/12s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [140s/213s] OK Examples with CPU (user + system) or elapsed time > 5s                           user system elapsed SRS_curve_pq 8.555 0.210 12.696 tbl_sum_taxtable 6.653 0.087 10.358 ggscatt_pq 5.828 0.328 9.572 LCBD_pq 5.394 0.149 7.558 psmelt_samples_pq 5.474 0.045 8.576 subset_taxa_tax_control 5.280 0.111 8.124 plot_refseq_extremity_pq 5.132 0.202 7.869 tbl_sum_samdata 4.998 0.109 7.107 plot_complexity_pq 4.782 0.055 7.924 sankey_pq 4.380 0.128 7.500 hill_curves_pq 3.883 0.173 6.689 filt_taxa_pq 3.416 0.554 5.811 umap_pq 3.330 0.160 6.083
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [112s/76s] OK   Running ‘spelling.R’ [0s/0s]   Running ‘testthat.R’ [112s/75s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [24s/36s] OK
• checking PDF version of manual ... [12s/16s] OK
• checking HTML version of manual ... [7s/13s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: OK