* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘MethEvolSIM’ ...
** this is package ‘MethEvolSIM’ version ‘0.2.1’
** package ‘MethEvolSIM’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘MethEvolSIM’
    finding HTML links ... done
    MeanSiteFChange_cherry                  html  
    categorize_islandGlbSt                  html  
    categorize_siteMethSt                   html  
    cftpStepGenerator                       html  
    combiStructureGenerator                 html  
    compare_CherryFreqs                     html  
    computeFitch_islandGlbSt                html  
    compute_fitch                           html  
    compute_meanCor_i                       html  
    compute_meanCor_ni                      html  
    countSites_cherryMethDiff               html  
    count_upm                               html  
    freqSites_cherryMethDiff                html  
    get_cherryDist                          html  
    get_islandMeanFreqM                     html  
    get_islandMeanFreqP                     html  
    get_islandSDFreqM                       html  
    get_islandSDFreqP                       html  
    get_meanMeth_islands                    html  
    get_nonislandMeanFreqM                  html  
    get_nonislandMeanFreqP                  html  
    get_nonislandSDFreqM                    html  
    get_nonislandSDFreqP                    html  
    get_parameterValues                     html  
    get_siteFChange_cherry                  html  
    mean_CherryFreqsChange_i                html  
    mean_TreeFreqsChange_i                  html  
    pValue_CherryFreqsChange_i              html  
    simulate_evolData                       html  
    simulate_initialData                    html  
    singleStructureGenerator                html  
    treeMultiRegionSimulator                html  
    validate_dataAcrossTips                 html  
    validate_data_cherryDist                html  
    validate_structureIndices               html  
    validate_tree                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MethEvolSIM)