* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘ManlyMix’ ...
** package ‘ManlyMix’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp2zH9mK/R.INSTALL3eecd2180d1471/ManlyMix/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -D__HAVE_R_ -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c crosen.c -o crosen.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -D__HAVE_R_ -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c crosenk.c -o crosenk.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -D__HAVE_R_ -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c libCEigen.c -o libCEigen.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -D__HAVE_R_ -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c libEVD.c -o libEVD.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -D__HAVE_R_ -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c libEVD_LAPACK.c -o libEVD_LAPACK.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -D__HAVE_R_ -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c libManly.c -o libManly.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -D__HAVE_R_ -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c libMatrix.c -o libMatrix.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -D__HAVE_R_ -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c libRandC.c -o libRandC.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -D__HAVE_R_ -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c liblambda.c -o liblambda.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -D__HAVE_R_ -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -D__HAVE_R_ -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c run_Manly.c -o run_Manly.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o ManlyMix.so crosen.o crosenk.o libCEigen.o libEVD.o libEVD_LAPACK.o libManly.o libMatrix.o libRandC.o liblambda.o registerDynamicSymbol.o run_Manly.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp2zH9mK/R.INSTALL3eecd2180d1471/ManlyMix/src'
make[1]: Entering directory '/tmp/Rtmp2zH9mK/R.INSTALL3eecd2180d1471/ManlyMix/src'
make[1]: Leaving directory '/tmp/Rtmp2zH9mK/R.INSTALL3eecd2180d1471/ManlyMix/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-ManlyMix/00new/ManlyMix/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘ManlyMix’
    finding HTML links ... done
    ClassAgree                              html  
    Manly.EM                                html  
    Manly.Kmeans                            html  
    Manly.model                             html  
    Manly.overlap                           html  
    Manly.plot                              html  
    Manly.select                            html  
    Manly.sim                               html  
    Manly.var                               html  
    ManlyMix-package                        html  
    acidity                                 html  
    ais                                     html  
    bankruptcy                              html  
    seeds                                   html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ManlyMix)