* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘MagmaClustR’ ...
** package ‘MagmaClustR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/RtmpEwAJeu/R.INSTALL3c25b42521ce9c/MagmaClustR/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c code.cpp -o code.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o MagmaClustR.so RcppExports.o code.o init.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpEwAJeu/R.INSTALL3c25b42521ce9c/MagmaClustR/src'
make[1]: Entering directory '/tmp/RtmpEwAJeu/R.INSTALL3c25b42521ce9c/MagmaClustR/src'
make[1]: Leaving directory '/tmp/RtmpEwAJeu/R.INSTALL3c25b42521ce9c/MagmaClustR/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-MagmaClustR/00new/MagmaClustR/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘MagmaClustR’
finding HTML links ... done
MagmaClustR html
chol_inv_jitter html
data_allocate_cluster html
dmnorm html
draw html
e_step html
elbo_GP_mod_common_hp_k html
elbo_clust_multi_GP html
elbo_clust_multi_GP_common_hp_i html
elbo_monitoring_VEM html
expand_grid_inputs html
gr_GP html
gr_GP_mod html
gr_GP_mod_common_hp html
gr_GP_mod_common_hp_k html
gr_clust_multi_GP html
gr_clust_multi_GP_common_hp_i html
gr_sum_logL_GP_clust html
hp html
hyperposterior html
hyperposterior_clust html
ini_kmeans html
ini_mixture html
kern_to_cov html
kern_to_inv html
lin_kernel html
list_kern_to_cov html
list_kern_to_inv html
logL_GP html
logL_GP_mod html
logL_GP_mod_common_hp html
logL_monitoring html
m_step html
perio_kernel html
pipe html
plot_db html
plot_gif html
plot_gp html
plot_magmaclust html
plot_samples html
pred_gif html
pred_gp html
pred_magma html
pred_magmaclust html
proba_max_cluster html
regularize_data html
rq_kernel html
sample_gp html
sample_magmaclust html
se_kernel html
select_nb_cluster html
simu_db html
simu_indiv_se html
sum_logL_GP_clust html
swimmers html
train_gp html
train_gp_clust html
train_magma html
train_magmaclust html
update_mixture html
ve_step html
vm_step html
weight html
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MagmaClustR)