• using R version 4.4.1 Patched (2024-08-05 r86980)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.2.0-3) 14.2.0     GNU Fortran (Debian 14.2.0-3) 14.2.0
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘MSwM/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘MSwM’ version ‘1.5’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘MSwM’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [5s/5s] OK
• checking Rd files ... [0s/0s] NOTE checkRd: (-1) msmFit.Rd:30: Lost braces     30 | -\code{trace}{: A logical value. If it is TRUE, tracing information on the progress of the optimization is produced.}        | ^ checkRd: (-1) msmFit.Rd:32: Lost braces     32 | -\code{maxiter}{: The maximum number of iterations in the EM method. Default is 100.}        | ^ checkRd: (-1) msmFit.Rd:34: Lost braces     34 | -\code{tol}{: Tolerance. The algorithm stops if it is unable to reduce the value by a factor of \code{tol} at a step. Default is 1e-8.}        | ^ checkRd: (-1) msmFit.Rd:36: Lost braces     36 | -\code{maxiterOuter}{: The number of short runs of the EM method to stablish the initial values. Default is 5}        | ^ checkRd: (-1) msmFit.Rd:38: Lost braces     38 | -\code{maxiterInner}{: The number of iterations in the EM method in each short run to stablish the initial values. Default is 10}        | ^ checkRd: (-1) msmFit.Rd:40: Lost braces     40 | -\code{parallelization}{: A logical value. Whether the process is done by using parallelization or not. Default is TRUE.}        | ^ checkRd: (-1) plotDiag.Rd:33: Lost braces     33 | - \code{1}{: represents the plot of residuals against fitted values. }        | ^ checkRd: (-1) plotDiag.Rd:35: Lost braces     35 | - \code{2}{: represents the Normal Q-Q plot. }        | ^ checkRd: (-1) plotDiag.Rd:37: Lost braces     37 | - \code{3}{: represents the ACF/PACF of residuals and ACF/PACF of square residuals. }        | ^ checkRd: (-1) plotProb.Rd:29: Lost braces     29 | -\code{1}{: represents the plots that contains, for each regime, its smoothed and filtered probabilities.}.        | ^ checkRd: (-1) plotProb.Rd:31: Lost braces     31 | -\code{2:(number of regimes +1)}{: represents plot of the regime minus one with the response variable against the smoothed probabilities.}        | ^
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [0s/0s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [5s/5s] OK
• checking PDF version of manual ... [3s/3s] OK
• checking HTML version of manual ... [0s/1s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 NOTE