* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘LogConcDEAD’ ...
** package ‘LogConcDEAD’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gcc... gcc-13
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc-13 accepts -g... yes
checking for gcc-13 option to accept ISO C89... none needed
checking whether gcc-13 understands -fno-strict-aliasing... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpWBCb9P/R.INSTALL3c5a8d7e0946cc/LogConcDEAD/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c LogConcDEAD_init.c -o LogConcDEAD_init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c convhull.c -o convhull.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c convhullnmlc.c -o convhullnmlc.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c delaunayn.c -o delaunayn.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c geom.c -o geom.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c geom2.c -o geom2.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c global.c -o global.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c io.c -o io.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c logconweights.c -o logconweights.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mem.c -o mem.o
mem.c: In function ‘qh_memfree’:
mem.c:192:7: warning: pointer ‘object’ may be used after ‘free’ [-Wuse-after-free]
192 | fprintf (qhmem.ferr, "qh_memfree long: %d bytes at %p\n", size, object);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mem.c:190:5: note: call to ‘free’ here
190 | free (object);
| ^~~~~~~~~~~~~
In file included from /usr/include/stdio.h:906,
from mem.c:35:
In function ‘fprintf’,
inlined from ‘qh_memfree’ at mem.c:192:7:
/usr/include/x86_64-linux-gnu/bits/stdio2.h:79:10: warning: pointer ‘object’ may be used after ‘free’ [-Wuse-after-free]
79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
80 | __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~
mem.c: In function ‘qh_memfree’:
mem.c:190:5: note: call to ‘free’ here
190 | free (object);
| ^~~~~~~~~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c merge.c -o merge.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c poly.c -o poly.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c poly2.c -o poly2.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c qhull.c -o qhull.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c qset.c -o qset.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c renormalise.c -o renormalise.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sigmaeffw.c -o sigmaeffw.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c solvoptweights.c -o solvoptweights.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c stat.c -o stat.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c subgradeffw.c -o subgradeffw.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c useful.c -o useful.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -fno-strict-aliasing -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c user.c -o user.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o LogConcDEAD.so LogConcDEAD_init.o convhull.o convhullnmlc.o delaunayn.o geom.o geom2.o global.o io.o logconweights.o mem.o merge.o poly.o poly2.o qhull.o qset.o renormalise.o sigmaeffw.o solvoptweights.o stat.o subgradeffw.o useful.o user.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpWBCb9P/R.INSTALL3c5a8d7e0946cc/LogConcDEAD/src'
make[1]: Entering directory '/tmp/RtmpWBCb9P/R.INSTALL3c5a8d7e0946cc/LogConcDEAD/src'
make[1]: Leaving directory '/tmp/RtmpWBCb9P/R.INSTALL3c5a8d7e0946cc/LogConcDEAD/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-LogConcDEAD/00new/LogConcDEAD/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘LogConcDEAD’
finding HTML links ... done
EMmixlcd html
LogConcDEAD-internal html
LogConcDEAD-package html
cov.LogConcDEAD html
dlcd html
dmarglcd html
dslcd html
getinfolcd html
getweights html
hatA html
interactive2D html
interplcd html
interpmarglcd html
mlelcd html
plot.LogConcDEAD html
print.LogConcDEAD html
rlcd html
rslcd html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (LogConcDEAD)