* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘LTFGRS’ ...
** this is package ‘LTFGRS’ version ‘1.0.0’
** package ‘LTFGRS’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxglHqi/R.INSTALL2f28374c1e03e7/LTFGRS/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c gibbs-sampler.cpp -o gibbs-sampler.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o LTFGRS.so RcppExports.o gibbs-sampler.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxglHqi/R.INSTALL2f28374c1e03e7/LTFGRS/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxglHqi/R.INSTALL2f28374c1e03e7/LTFGRS/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxglHqi/R.INSTALL2f28374c1e03e7/LTFGRS/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-LTFGRS/00new/LTFGRS/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘LTFGRS’
    finding HTML links ... done
    Gibbs_estimator                         html  
    LTFGRS-package                          html  
    PA_algorithm                            html  
    attach_attributes                       html  
    censor_family_onsets                    html  
    construct_covmat                        html  
    construct_covmat_multi                  html  
    construct_covmat_single                 html  
    convert_age_to_cir                      html  
    convert_age_to_thresh                   html  
    convert_cir_to_age                      html  
    convert_format                          html  
    convert_liability_to_aoo                html  
    convert_observed_to_liability_scale     html  
    correct_positive_definite               html  
    estimate_gen_liability_ltfh             html  
    estimate_liability                      html  
    estimate_liability_multi                html  
    estimate_liability_single               html  
    extract_estimation_info_graph           html  
    extract_estimation_info_tbl             html  
    familywise_attach_attributes            html  
    familywise_censoring                    html  
    fixSexCoding                            html  
    get_all_combs                           html  
    get_covmat                              html  
    get_family_graphs                       html  
    get_onset_time                          html  
    get_relatedness                         html  
    graph_based_covariance_construction     html  
    graph_based_covariance_construction_multi
                                            html  
    graph_to_trio                           html  
    kendler                                 html  
    kendler_family_calculations             html  
    prepare_graph                           html  
    prepare_thresholds                      html  
    rtmvnorm.gibbs                          html  
    simulate_under_LTM                      html  
    simulate_under_LTM_multi                html  
    simulate_under_LTM_single               html  
    tnorm_mean                              html  
    tnorm_mixture_conditional               html  
    tnorm_var                               html  
    truncated_normal_cdf                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (LTFGRS)