* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘KERE’ ...
** package ‘KERE’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp8JiQBS/R.INSTALL22fa8f650b338f/KERE/src'
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c expkern_fast.f90 -o expkern_fast.o
expkern_fast.f90:29:2:
29 | DOUBLE PRECISION :: mbd
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:30:2:
30 | DOUBLE PRECISION :: Ginv
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:31:2:
31 | DOUBLE PRECISION :: r (nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:32:2:
32 | DOUBLE PRECISION :: phi (nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:33:2:
33 | DOUBLE PRECISION :: alpvec (nobs+1)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:34:2:
34 | DOUBLE PRECISION :: oalpvec (nobs+1)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:35:2:
35 | DOUBLE PRECISION :: dif (nobs+1)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:36:2:
36 | DOUBLE PRECISION :: Ddiag (nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:37:2:
37 | DOUBLE PRECISION :: Ainv (nobs, nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:38:2:
38 | DOUBLE PRECISION :: BAmat (nobs, nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:39:2:
39 | DOUBLE PRECISION :: Qinv (nobs, nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:40:2:
40 | DOUBLE PRECISION :: QKsum (nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:41:2:
41 | DOUBLE PRECISION :: KUinv (nobs+1, nobs+1)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:42:2:
42 | DOUBLE PRECISION :: Ktemp (nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:48:2:
48 | mbd = 2.0D0 * MAX(1.0D0-omega, omega)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:49:2:
49 | npass = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:50:2:
50 | r = y
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:51:2:
51 | alpmat = 0.0D0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:52:2:
52 | alpvec = 0.0D0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:53:2:
53 | lambda_loop: DO l = 1,nlam
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:54:2:
54 | dif = 0.0D0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:56:2:
56 | Ddiag = 1.0D0/(Dvec*Dvec + 2.0D0*ulam(l)*Dvec/mbd)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:57:2:
57 | Ainv = Umat * SPREAD(Ddiag, DIM=1, NCOPIES = nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:58:2:
58 | Ainv = MATMUL(Ainv, TRANSPOSE(Umat))
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:59:2:
59 | Ktemp = MATMUL(Ksum, Ainv)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:60:2:
60 | FORALL (i=1:nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:61:2:
61 | FORALL(j=1:nobs) BAmat(i,j) = - Ksum(i) * Ktemp(j) / REAL(nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:62:2:
62 | END FORALL
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:63:2:
63 | Ginv = 1.0D0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:64:2:
64 | DO j = 1, nobs
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:65:2:
65 | Ginv = Ginv + BAmat(j, j)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:66:2:
66 | ENDDO
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:67:2:
67 | Ginv = 1.0D0 / Ginv
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:68:2:
68 | Qinv = Ainv - Ginv * MATMUL(Ainv, BAmat)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:69:2:
69 | QKsum = MATMUL(Qinv, Ksum) / REAL(nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:70:2:
70 | KUinv = 0.0D0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:71:2:
71 | KUinv(1, 1) = (1.0D0 + DOT_PRODUCT(QKsum, Ksum)) / REAL(nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:72:2:
72 | KUinv(1, 2:(nobs+1)) = -QKsum
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:73:2:
73 | KUinv(2:(nobs+1), 1) = -QKsum
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:74:2:
74 | KUinv(2:(nobs+1), 2:(nobs+1)) = Qinv
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:76:2:
76 | alpha_loop: DO
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:77:2:
77 | DO j = 1, nobs
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:84:2:
84 | oalpvec = alpvec
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:85:2:
85 | alpvec = oalpvec + (2.0D0/mbd) * MATMUL(KUinv, &
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:87:2:
87 | dif = alpvec - oalpvec
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:88:2:
88 | r = r - MATMUL(dif, Ki)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:89:2:
89 | IF (DOT_PRODUCT(dif,dif)/DOT_PRODUCT(oalpvec,oalpvec) < eps) EXIT
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:90:2:
90 | npass(l) = npass(l) + 1
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:91:2:
91 | IF (SUM(npass) > maxit) EXIT
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:92:2:
92 | ENDDO alpha_loop
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:93:2:
93 | alpmat(:, l) = alpvec
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:94:2:
94 | IF (SUM(npass) > maxit) THEN
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:95:2:
95 | jerr = -l
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:96:2:
96 | EXIT
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:97:2:
97 | ENDIF
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:98:2:
98 | anlam = l
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_fast.f90:99:2:
99 | ENDDO lambda_loop
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c expkern_precision.f90 -o expkern_precision.o
expkern_precision.f90:29:2:
29 | DOUBLE PRECISION :: mbd
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:30:2:
30 | DOUBLE PRECISION :: Ginv
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:31:2:
31 | DOUBLE PRECISION :: r (nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:32:2:
32 | DOUBLE PRECISION :: phi (nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:33:2:
33 | DOUBLE PRECISION :: alpvec (nobs+1)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:34:2:
34 | DOUBLE PRECISION :: oalpvec (nobs+1)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:35:2:
35 | DOUBLE PRECISION :: dif (nobs+1)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:36:2:
36 | DOUBLE PRECISION :: Ddiag (nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:37:2:
37 | DOUBLE PRECISION :: Ainv (nobs, nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:38:2:
38 | DOUBLE PRECISION :: BAmat (nobs, nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:39:2:
39 | DOUBLE PRECISION :: Bmat (nobs, nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:40:2:
40 | DOUBLE PRECISION :: Qinv (nobs, nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:41:2:
41 | DOUBLE PRECISION :: QKsum (nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:42:2:
42 | DOUBLE PRECISION :: KUinv (nobs+1, nobs+1)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:48:2:
48 | mbd = 2.0D0 * MAX(1.0D0-omega, omega)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:49:2:
49 | npass = 0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:50:2:
50 | r = y
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:51:2:
51 | alpmat = 0.0D0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:52:2:
52 | alpvec = 0.0D0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:53:2:
53 | Bmat = - spread(Ksum,dim=2,ncopies=nobs) &
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:55:2:
55 | lambda_loop: DO l = 1,nlam
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:56:2:
56 | dif = 0.0D0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:58:2:
58 | Ddiag = 1.0D0/(Dvec*Dvec + 2.0D0*ulam(l)*Dvec/mbd)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:59:2:
59 | Ainv = Umat * SPREAD(Ddiag, DIM=1, NCOPIES = nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:60:2:
60 | Ainv = MATMUL(Ainv, TRANSPOSE(Umat))
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:61:2:
61 | BAmat = MATMUL(Bmat, Ainv)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:62:2:
62 | Ginv = 1.0D0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:63:2:
63 | DO j = 1, nobs
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:64:2:
64 | Ginv = Ginv + BAmat(j, j)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:65:2:
65 | ENDDO
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:66:2:
66 | Ginv = 1.0D0 / Ginv
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:67:2:
67 | Qinv = Ainv - Ginv * MATMUL(Ainv, BAmat)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:68:2:
68 | QKsum = MATMUL(Qinv, Ksum) / REAL(nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:69:2:
69 | KUinv = 0.0D0
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:70:2:
70 | KUinv(1, 1) = (1.0D0 + DOT_PRODUCT(QKsum, Ksum)) / REAL(nobs)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:71:2:
71 | KUinv(1, 2:(nobs+1)) = -QKsum
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:72:2:
72 | KUinv(2:(nobs+1), 1) = -QKsum
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:73:2:
73 | KUinv(2:(nobs+1), 2:(nobs+1)) = Qinv
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:75:2:
75 | alpha_loop: DO
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:76:2:
76 | DO j = 1, nobs
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:83:2:
83 | oalpvec = alpvec
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:84:2:
84 | alpvec = oalpvec + (2.0D0/mbd) * MATMUL(KUinv, &
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:86:2:
86 | dif = alpvec - oalpvec
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:87:2:
87 | r = r - MATMUL(dif, Ki)
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:88:2:
88 | IF (DOT_PRODUCT(dif,dif)/DOT_PRODUCT(oalpvec,oalpvec) < eps) EXIT
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:89:2:
89 | npass(l) = npass(l) + 1
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:90:2:
90 | IF (SUM(npass) > maxit) EXIT
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:91:2:
91 | ENDDO alpha_loop
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:92:2:
92 | alpmat(:, l) = alpvec
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:93:2:
93 | IF (SUM(npass) > maxit) THEN
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:94:2:
94 | jerr = -l
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:95:2:
95 | EXIT
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:96:2:
96 | ENDIF
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:97:2:
97 | anlam = l
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:98:2:
98 | ENDDO lambda_loop
| 1
Warning: Nonconforming tab character at (1) [-Wtabs]
expkern_precision.f90:25:18:
25 | INTEGER :: i
| 1
Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable]
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o KERE.so expkern_fast.o expkern_precision.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp8JiQBS/R.INSTALL22fa8f650b338f/KERE/src'
make[1]: Entering directory '/tmp/Rtmp8JiQBS/R.INSTALL22fa8f650b338f/KERE/src'
make[1]: Leaving directory '/tmp/Rtmp8JiQBS/R.INSTALL22fa8f650b338f/KERE/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-KERE/00new/KERE/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘KERE’
finding HTML links ... done
KERE html
as.kernelMatrix html
cv.KERE html
dots html
kernel-class html
kernelMatrix html
plot.KERE html
predict.KERE html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (KERE)