* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘IFC’ ...
** package ‘IFC’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/RtmpAjEgCj/R.INSTALL341fcb37ac4fda/IFC/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ifc.cpp -o ifc.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o IFC.so RcppExports.o ifc.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpAjEgCj/R.INSTALL341fcb37ac4fda/IFC/src'
make[1]: Entering directory '/tmp/RtmpAjEgCj/R.INSTALL341fcb37ac4fda/IFC/src'
make[1]: Leaving directory '/tmp/RtmpAjEgCj/R.INSTALL341fcb37ac4fda/IFC/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-IFC/00new/IFC/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘IFC’
finding HTML links ... done
BatchReport html
BatchStatsReport html
CreateGraphReport html
DisplayGallery html
DisplayReport html
ExportToBATCH html
ExportToDAF html
ExportToFCS html
ExportToGallery html
ExportToNumpy html
ExportToReport html
ExportToXIF html
ExtractFromDAF html
ExtractFromFCS html
ExtractFromXIF html
ExtractImages_toBase64 html
ExtractImages_toFile html
ExtractImages_toMatrix html
ExtractMasks_toBase64 html
ExtractMasks_toFile html
ExtractMasks_toMatrix html
FCS_check_keywords html
FCS_merge_dataset html
FCS_merge_sample html
FCS_to_data html
IFC-package html
StatsReport html
XIFtoTIFF html
addScaleBar html
addText html
adjustGraph html
applyGatingStrategy html
applyTrans html
assert html
autoplot html
base64_encode html
base_axis_constr html
base_hist_constr html
buildBatch html
buildFeature html
buildGraph html
buildIFD html
buildImage html
buildMask html
buildPopulation html
buildRegion html
buildStats html
calcDensity html
checkColor html
checkObj html
checksumDAF html
checksumIFC html
checksumXIF html
colConv html
collapse_raw html
computeGamma html
convert_spillover html
coord_to_px html
cpp_M_HSV2RGB html
cpp_align html
cpp_as_nativeRaster html
cpp_assert html
cpp_base64_encode html
cpp_checkTIFF html
cpp_checksum html
cpp_cleanse html
cpp_computeGamma html
cpp_coord_to_px html
cpp_crop html
cpp_decomp html
cpp_draw html
cpp_ell_coord html
cpp_extract html
cpp_fastTAGS html
cpp_fast_factor html
cpp_fast_listAny html
cpp_fast_range html
cpp_fast_rowAny html
cpp_fast_sample html
cpp_getBits html
cpp_getTAGS html
cpp_get_bytes_order html
cpp_getoffsets_noid html
cpp_getoffsets_wid html
cpp_group_df html
cpp_int32_to_uint32 html
cpp_int64_to_uint64 html
cpp_inv_smoothLinLog html
cpp_mark html
cpp_mask html
cpp_mpfmatch html
cpp_normalize html
cpp_offset_to_raw html
cpp_pnt_in_gate html
cpp_raster html
cpp_raw_to_offset html
cpp_rawdecomp html
cpp_replace_non_finite html
cpp_resize html
cpp_scanFirst html
cpp_seqmatch html
cpp_smoothLinLog html
cpp_transform html
cpp_uint32_to_int32 html
cpp_uint32_to_raw html
cpp_uint64_to_int64 html
cpp_v_int32_to_uint32 html
cpp_v_int64_to_uint64 html
cpp_writeBMP html
data_add_features html
data_add_graphs html
data_add_pop_sample html
data_add_pops html
data_add_regions html
data_modify_pops html
data_modify_regions html
data_rm_features html
data_rm_graphs html
data_rm_pops html
data_rm_regions html
data_to_AST html
data_to_DAF html
densCols html
endPB html
escape_entities html
expand_list html
extractStats html
fastAny html
fastCbind html
featureIFC html
feature_namer html
fetch_seed html
formatn html
fromXML2_gating html
gen_altnames html
getASSIST html
getAborted html
getFeaturesValues html
getFileExt html
getFullTag html
getIFD html
getImagesValues html
getInfo html
getLuminance html
getOffsets html
getSTATSREPORT html
get_coordmap_adjusted html
get_coordmap_raw html
get_feat_value html
get_pops_stats html
get_ylim html
group html
gseq html
hist_constr html
inv_colConv html
inv_smoothAsinh html
inv_smoothLinLog html
layoutReport html
map_color html
map_style html
mergeXIF html
modifyGamma html
myScales html
newPB html
next_bool html
num_to_string html
objectCleanse html
objectColorize html
objectDisplay html
objectExtract html
objectNormalize html
objectParam html
objectResize html
objectTransform html
objectWrite html
paletteIFC html
pan_hist html
pan_key html
pan_smooth html
parseFCSname html
parseTrans html
plotGraph html
plot_base html
plot_lattice html
plot_raster html
plot_stats html
polyExtractTo html
popsCompute html
popsCopy html
popsGetAffiliation html
popsGetLevels html
popsGetObjectsIds html
popsGetSiblings html
popsGetSiblings1 html
popsGetSiblings2 html
popsNetwork html
popsOrderNodes html
popsRename html
popsRetrieveGraph html
popsWithin html
pow2 html
protectn html
pseudo_seed html
random_name html
rasterplot html
readFCS html
readFCSdata html
readFCSdataset html
readFCSdelimiter html
readFCSheader html
readFCStext html
readGatingML html
readGatingStrategy html
readIFC html
redefine_features_def html
redefine_features_def_feat html
redefine_features_def_msk_img html
redefine_masks html
redefine_masks_image html
redefine_masks_mask html
redefine_obj html
relayout html
remove_ext html
rev_string html
setPB html
smoothAsinh html
smoothLinLog html
specialr html
split_feat html
splitf html
splitn html
splitp html
subsetOffsets html
subsetXIF html
swap_channel html
switch_channel html
testXIF html
texttomatrix html
toBIN_features html
toBIN_images html
toCapFirstOnly html
toEllipse html
toXML2_boolpop_gs html
toXML2_features html
toXML2_features_def html
toXML2_graphpop_gs html
toXML2_graphs html
toXML2_graphs_gs html
toXML2_images html
toXML2_masks html
toXML2_pops html
toXML2_regions html
toXML2_spillover_gs html
toXML2_stats html
to_list_node html
to_xml_list html
trunc_string html
tryReportFileCreation html
type_constr html
usedefault_obj html
val_constr html
validate_bool html
whoami html
with_seed html
writeGatingStrategy html
writeIFC html
writeIFD html
xml_new_node html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (IFC)