* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘Hmisc’ ... ** package ‘Hmisc’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/tmp/RtmpFy2gaT/R.INSTALL3ab59c19e927a7/Hmisc/src' gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Hmisc.c -o Hmisc.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c cidxcn.f -o cidxcn.o cidxcn.f:70:5: 70 | 23003 continue | 1 Warning: Label 23003 at (1) defined but not used [-Wunused-label] cidxcn.f:77:5: 77 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] gfortran-13 -fpic -g -O2 -Wall -mtune=native -c cidxcp.f -o cidxcp.o cidxcp.f:64:5: 64 | 23003 continue | 1 Warning: Label 23003 at (1) defined but not used [-Wunused-label] cidxcp.f:71:5: 71 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] gfortran-13 -fpic -g -O2 -Wall -mtune=native -c hoeffd.f -o hoeffd.o hoeffd.f:50:5: 50 | 23017 continue | 1 Warning: Label 23017 at (1) defined but not used [-Wunused-label] hoeffd.f:52:5: 52 | 23015 continue | 1 Warning: Label 23015 at (1) defined but not used [-Wunused-label] hoeffd.f:28:5: 28 | 23009 continue | 1 Warning: Label 23009 at (1) defined but not used [-Wunused-label] hoeffd.f:39:5: 39 | 23007 continue | 1 Warning: Label 23007 at (1) defined but not used [-Wunused-label] hoeffd.f:15:5: 15 | 23003 continue | 1 Warning: Label 23003 at (1) defined but not used [-Wunused-label] hoeffd.f:41:5: 41 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] hoeffd.f:76:5: 76 | 23019 continue | 1 Warning: Label 23019 at (1) defined but not used [-Wunused-label] hoeffd.f:113:5: 113 | 23023 continue | 1 Warning: Label 23023 at (1) defined but not used [-Wunused-label] hoeffd.f:118:5: 118 | 23021 continue | 1 Warning: Label 23021 at (1) defined but not used [-Wunused-label] gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c jacklins.f -o jacklins.o jacklins.f:16:5: 16 | 23005 continue | 1 Warning: Label 23005 at (1) defined but not used [-Wunused-label] jacklins.f:19:5: 19 | 23003 continue | 1 Warning: Label 23003 at (1) defined but not used [-Wunused-label] jacklins.f:21:5: 21 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] gfortran-13 -fpic -g -O2 -Wall -mtune=native -c largrec.f -o largrec.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mChoice.c -o mChoice.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c maxempr.f -o maxempr.o maxempr.f:54:5: 54 | 23015 continue | 1 Warning: Label 23015 at (1) defined but not used [-Wunused-label] maxempr.f:33:5: 33 | 23005 continue | 1 Warning: Label 23005 at (1) defined but not used [-Wunused-label] maxempr.f:65:5: 65 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c nstr.c -o nstr.o gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ranksort.c -o ranksort.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c rcorr.f -o rcorr.o rcorr.f:76:5: 76 | 23023 continue | 1 Warning: Label 23023 at (1) defined but not used [-Wunused-label] rcorr.f:78:5: 78 | 23021 continue | 1 Warning: Label 23021 at (1) defined but not used [-Wunused-label] rcorr.f:52:5: 52 | 23011 continue | 1 Warning: Label 23011 at (1) defined but not used [-Wunused-label] rcorr.f:67:5: 67 | 23007 continue | 1 Warning: Label 23007 at (1) defined but not used [-Wunused-label] rcorr.f:22:5: 22 | 23003 continue | 1 Warning: Label 23003 at (1) defined but not used [-Wunused-label] rcorr.f:69:5: 69 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] rcorr.f:101:5: 101 | 23025 continue | 1 Warning: Label 23025 at (1) defined but not used [-Wunused-label] gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c string_box.c -o string_box.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c wclosest.f -o wclosest.o wclosest.f:17:5: 17 | 23003 continue | 1 Warning: Label 23003 at (1) defined but not used [-Wunused-label] wclosest.f:20:5: 20 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] wclosest.f:52:5: 52 | 23013 continue | 1 Warning: Label 23013 at (1) defined but not used [-Wunused-label] wclosest.f:42:5: 42 | 23011 continue | 1 Warning: Label 23011 at (1) defined but not used [-Wunused-label] wclosest.f:34:5: 34 | 23009 continue | 1 Warning: Label 23009 at (1) defined but not used [-Wunused-label] wclosest.f:55:5: 55 | 23007 continue | 1 Warning: Label 23007 at (1) defined but not used [-Wunused-label] gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o Hmisc.so Hmisc.o cidxcn.o cidxcp.o hoeffd.o init.o jacklins.o largrec.o mChoice.o maxempr.o nstr.o ranksort.o rcorr.o string_box.o wclosest.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/tmp/RtmpFy2gaT/R.INSTALL3ab59c19e927a7/Hmisc/src' make[1]: Entering directory '/tmp/RtmpFy2gaT/R.INSTALL3ab59c19e927a7/Hmisc/src' make[1]: Leaving directory '/tmp/RtmpFy2gaT/R.INSTALL3ab59c19e927a7/Hmisc/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-Hmisc/00new/Hmisc/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘Hmisc’ finding HTML links ... done Cs html Ecdf html GiniMd html Hmisc-internal html Lag html Merge html Misc html Overview html R2Measures html Save html abs.error.pred html addMarginal html addggLayers html all.is.numeric html approxExtrap html areg html aregImpute html biVar html binconf html bootkm html bpower html bpplot html bystats html capitalize html ciapower html cnvrt.coords html combine.levels html combplotp html completer html consolidate html contents html cpower html csv.get html curveRep html cut2 html data.frame.create.modify.check html dataRep html deff html describe html discrete html dotchart2 html dotchart3 html dotchartpl html ebpcomp html ecdfSteps html epi html equalBins html errbar html escapeRegex html estSeqMarkovOrd html estSeqSim html event.chart html event.convert html event.history html extractlabs html fImport html find.matches html first.word html format.df html format.pval html gbayes html gbayesSeqSim html getHdata html getRs html getZip html getabd html ggMisc html ggfreqScatter html ggplotlyr html hashCheck html hdquantile html hidingTOC html hist.data.frame html histbackback html histboxp html hlab html hlabs html hoeffd html html html htmltabv html impute html intMarkovOrd html knitrSet html labcurve html label html latestFile html latex html latexCheckOptions html latexDotchart html latexTabular html latexTherm html legendfunctions html list.tree html mApply html mChoice html makeNstr html mdb.get html meltData html mgp.axis html minor.tick html movStats html mtitle html multLines html nCoincident html na.delete html na.detail.response html na.keep html nin html nobsY html nstr html num.intercepts html pairUpDiff html panel.bpplot html partition html pc1 html plot.princmp html plotCorrM html plotCorrPrecision html plotlyM html plsmo html popower html finding level-2 HTML links ... done princmp html print.char.list html print.char.matrix html print.princmp html prnz html prselect html pstamp html qcrypt html rMultinom html rcorr html rcorr.cens html rcorrp.cens html rcspline.eval html rcspline.plot html rcspline.restate html reShape html redun html rlegend html rm.boot html runParallel html runifChanged html samplesize.bin html sasxport.get html scat1d html score.binary html sedit html seqFreq html show.pch html showPsfrag html simMarkovOrd html simRegOrd html simplifyDims html smean.sd html solvet html somers2 html soprobMarkovOrd html soprobMarkovOrdm html spikecomp html spower html spss.get html src html stat_plsmo html stata.get html string.bounding.box html string.break.line html stringDims html subplot html summarize html summary.formula html summaryM html summaryP html summaryRc html summaryS html symbol.freq html sys html t.test.cluster html tabulr html testCharDateTime html tex html transace html transcan html translate html trunc.POSIXt html units html upData html upFirst html valueTags html varclus html vlab html wtd.stats html xYplot html xtfrm.labelled html xy.group html yearDays html ynbind html sas.get html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Hmisc)