* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘HTSSIP’ ...
** package ‘HTSSIP’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘HTSSIP’
    finding HTML links ... done
    BD_shift                                html  
    DESeq2_l2fc                             html  
    HRSIP                                   html  
    HTSSIP                                  html  
    HTSSIP_sim                              html  
    OTU_qPCR_trans                          html  
    SIP_betaDiv_ord                         html  
    as.Num                                  html  
    calc_Gi                                 html  
    calc_Mheavymax                          html  
    calc_atom_excess                        html  
    data-physeq_S2D1                        html  
    data-physeq_S2D1_l                      html  
    data-physeq_S2D2                        html  
    data-physeq_S2D2_l                      html  
    data-physeq_rep3                        html  
    data-physeq_rep3_qPCR                   html  
    delta_BD                                html  
    evaluate_matches                        html  
    expr_param_extract                      html  
    extract_expressions                     html  
    extract_formats                         html  
    filter_l2fc                             html  
    format_metadata                         html  
    fraction_overlap                        html  
    get_treatment_params                    html  
    gradient_sim                            html  
    heavy_SIP                               html  
    match_brace                             html  
    match_placeholders                      html  
    max_BD_range                            html  
    overlap_wmean_dist                      html  
    parse_dist                              html  
    perc_overlap                            html  
    phyloseq2df                             html  
    phyloseq2table                          html  
    phyloseq_list_ord_dfs                   html  
    phyloseq_ord_plot                       html  
    phyloseq_subset                         html  
    physeq_format                           html  
    physeq_list_betaDiv                     html  
    physeq_list_ord                         html  
    qPCR_sim                                html  
    qSIP_atom_excess                        html  
    qSIP_atom_excess_format                 html  
    qSIP_bootstrap                          html  
    stringterpolate                         html  
    tss                                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (HTSSIP)