* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘HMMextra0s’ ...
** package ‘HMMextra0s’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’
using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/Rtmpy85GkV/R.INSTALL2288bd2b47bb3e/HMMextra0s/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c HMMextra0s_init.c -o HMMextra0s_init.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c  estep.f90 -o estep.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c  loop1.f90 -o loop1.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c  loop2.f90 -o loop2.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c  mstep.f90 -o mstep.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c  prsloop.f90 -o prsloop.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o HMMextra0s.so HMMextra0s_init.o estep.o loop1.o loop2.o mstep.o prsloop.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpy85GkV/R.INSTALL2288bd2b47bb3e/HMMextra0s/src'
make[1]: Entering directory '/tmp/Rtmpy85GkV/R.INSTALL2288bd2b47bb3e/HMMextra0s/src'
make[1]: Leaving directory '/tmp/Rtmpy85GkV/R.INSTALL2288bd2b47bb3e/HMMextra0s/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-HMMextra0s/00new/HMMextra0s/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘HMMextra0s’
    finding HTML links ... done
    HMMextra0s-package                      html  
    Kii                                     html  
    Viterbi.hmm0norm                        html  
    Viterbi.hmm0norm2d                      html  
    cumdist.hmm0norm                        html  
    hmm0norm                                html  
    hmm0norm2d                              html  
    plotVitloc2d                            html  
    plotVitpath2d                           html  
    sim.hmm0norm                            html  
    sim.hmm0norm2d                          html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (HMMextra0s)