* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘GeoModels’ ...
** this is package ‘GeoModels’ version ‘2.2.8’
** package ‘GeoModels’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-16 (Debian 16.2.0-1) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpMDjpeS/R.INSTALL19bc80417cb67/GeoModels/src'
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c 1F1.c -o 1F1.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c 2F1.c -o 2F1.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c 2F1_v2.c -o 2F1_v2.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c 2gammainc.c -o 2gammainc.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c 2kummer.c -o 2kummer.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c CompositeLikelihood2.c -o CompositeLikelihood2.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c CompositeLikelihood2_ani.c -o CompositeLikelihood2_ani.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c CompositeLikelihoodCond2.c -o CompositeLikelihoodCond2.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c CompositeLikelihoodCond2_ani.c -o CompositeLikelihoodCond2_ani.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c CorrelationFunction.c -o CorrelationFunction.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Distributions.c -o Distributions.o
In function ‘pg_hyp_bseq_get’,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_positive’ at Distributions.c:5047:29:
Distributions.c:4516:45: warning: ‘hseq.a1’ may be used uninitialized [-Wmaybe-uninitialized]
4516 | val = -((2.0*bcur - st->c + (st->a1 - bcur)*st->z) * st->fm1
| ~~~~~~~~^~~~~~~
Distributions.c: In function ‘PGrt_positive’:
Distributions.c:4985:19: note: ‘hseq.a1’ was declared here
4985 | PGHypBSeq hseq;
| ^~~~
In function ‘pg_hyp_bseq_get’,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_positive’ at Distributions.c:5047:29:
Distributions.c:4514:22: warning: ‘hseq.shape’ may be used uninitialized [-Wmaybe-uninitialized]
4514 | const double bcur = 1.0 - (double)(l1 - 1) - st->shape;
| ^~~~
Distributions.c: In function ‘PGrt_positive’:
Distributions.c:4985:19: note: ‘hseq.shape’ was declared here
4985 | PGHypBSeq hseq;
| ^~~~
In function ‘pg_hyp_bseq_get’,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_positive’ at Distributions.c:5047:29:
Distributions.c:4516:27: warning: ‘hseq.c’ may be used uninitialized [-Wmaybe-uninitialized]
4516 | val = -((2.0*bcur - st->c + (st->a1 - bcur)*st->z) * st->fm1
| ~~~~~~~~~^~~~~~~
Distributions.c: In function ‘PGrt_positive’:
Distributions.c:4985:19: note: ‘hseq.c’ was declared here
4985 | PGHypBSeq hseq;
| ^~~~
In function ‘pg_hyp_bseq_get’,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_positive’ at Distributions.c:5047:29:
Distributions.c:4517:31: warning: ‘hseq.z’ may be used uninitialized [-Wmaybe-uninitialized]
4517 | + bcur*(st->z - 1.0) * st->fm2) / den;
| ~~~~~~~^~~~~~
Distributions.c: In function ‘PGrt_positive’:
Distributions.c:4985:19: note: ‘hseq.z’ was declared here
4985 | PGHypBSeq hseq;
| ^~~~
In function ‘pg_hyp_bseq_anchor’,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4519:19,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_positive’ at Distributions.c:5047:29:
Distributions.c:4470:56: warning: ‘hseq.a_int’ may be used uninitialized [-Wmaybe-uninitialized]
4470 | const int mpoly = st->a_int ? (l1 + st->a_int - 1) : -1;
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
Distributions.c: In function ‘PGrt_positive’:
Distributions.c:4985:19: note: ‘hseq.a_int’ was declared here
4985 | PGHypBSeq hseq;
| ^~~~
In function ‘pg_hyp_bseq_get’,
inlined from ‘PGrt_positive’ at Distributions.c:5047:29:
Distributions.c:4500:8: warning: ‘hseq.enabled’ may be used uninitialized [-Wmaybe-uninitialized]
4500 | if (!st->enabled || l1 != st->last_l1 + 1) {
| ^
Distributions.c: In function ‘PGrt_positive’:
Distributions.c:4985:19: note: ‘hseq.enabled’ was declared here
4985 | PGHypBSeq hseq;
| ^~~~
In function ‘pg_hyp_bseq_get’,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_positive’ at Distributions.c:5047:29:
Distributions.c:4508:74: warning: ‘hseq.force_direct_next’ may be used uninitialized [-Wmaybe-uninitialized]
4508 | if ((st->use_integral_seeds ? (l1 < 2) : ((l1 % PG_HREC_BLOCK) < 2)) ||
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
4509 | st->force_direct_next || l1 < 2) {
| ~~~~~~~~~~~~~~~~~~~~~
Distributions.c: In function ‘PGrt_positive’:
Distributions.c:4985:19: note: ‘hseq.force_direct_next’ was declared here
4985 | PGHypBSeq hseq;
| ^~~~
In function ‘pg_hyp_bseq_get’,
inlined from ‘PGrt_positive’ at Distributions.c:5047:29:
Distributions.c:4500:43: warning: ‘hseq.last_l1’ may be used uninitialized [-Wmaybe-uninitialized]
4500 | if (!st->enabled || l1 != st->last_l1 + 1) {
| ~~~~~~~~~~~~^~~
Distributions.c: In function ‘PGrt_positive’:
Distributions.c:4985:19: note: ‘hseq.last_l1’ was declared here
4985 | PGHypBSeq hseq;
| ^~~~
In function ‘pg_hyp_bseq_get’,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_positive’ at Distributions.c:5047:29:
Distributions.c:4517:38: warning: ‘hseq.fm2’ may be used uninitialized [-Wmaybe-uninitialized]
4517 | + bcur*(st->z - 1.0) * st->fm2) / den;
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~
Distributions.c: In function ‘PGrt_positive’:
Distributions.c:4985:19: note: ‘hseq.fm2’ was declared here
4985 | PGHypBSeq hseq;
| ^~~~
In function ‘pg_hyp_bseq_get’,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_positive’ at Distributions.c:5047:29:
Distributions.c:4516:60: warning: ‘hseq.fm1’ may be used uninitialized [-Wmaybe-uninitialized]
4516 | val = -((2.0*bcur - st->c + (st->a1 - bcur)*st->z) * st->fm1
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
Distributions.c: In function ‘PGrt_positive’:
Distributions.c:4985:19: note: ‘hseq.fm1’ was declared here
4985 | PGHypBSeq hseq;
| ^~~~
In function ‘pg_hyp_bparam’,
inlined from ‘pg_hyp_bseq_anchor’ at Distributions.c:4473:12,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4510:15,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_h2beta_core’ at Distributions.c:5637:29:
Distributions.c:4303:12: warning: ‘hseq_s.a1’ may be used uninitialized [-Wmaybe-uninitialized]
4303 | return hypergeo(a1, bpar, c, z);
| ^~~~~~~~~~~~~~~~~~~~~~~~
Distributions.c: In function ‘PGrt_h2beta_core’:
Distributions.c:5598:27: note: ‘hseq_s.a1’ was declared here
5598 | PGHypBSeq hseq_l, hseq_s;
| ^~~~~~
In function ‘pg_hyp_bseq_anchor’,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4510:15,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_h2beta_core’ at Distributions.c:5637:29:
Distributions.c:4469:18: warning: ‘hseq_s.shape’ may be used uninitialized [-Wmaybe-uninitialized]
4469 | const double bpar = 1.0 - (double)l1 - st->shape;
| ^~~~
Distributions.c: In function ‘PGrt_h2beta_core’:
Distributions.c:5598:27: note: ‘hseq_s.shape’ was declared here
5598 | PGHypBSeq hseq_l, hseq_s;
| ^~~~~~
In function ‘pg_hyp_bparam’,
inlined from ‘pg_hyp_bseq_anchor’ at Distributions.c:4473:12,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4510:15,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_h2beta_core’ at Distributions.c:5637:29:
Distributions.c:4303:12: warning: ‘hseq_s.c’ may be used uninitialized [-Wmaybe-uninitialized]
4303 | return hypergeo(a1, bpar, c, z);
| ^~~~~~~~~~~~~~~~~~~~~~~~
Distributions.c: In function ‘PGrt_h2beta_core’:
Distributions.c:5598:27: note: ‘hseq_s.c’ was declared here
5598 | PGHypBSeq hseq_l, hseq_s;
| ^~~~~~
In function ‘pg_hyp_bparam’,
inlined from ‘pg_hyp_bseq_anchor’ at Distributions.c:4473:12,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4510:15,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_h2beta_core’ at Distributions.c:5637:29:
Distributions.c:4303:12: warning: ‘hseq_s.z’ may be used uninitialized [-Wmaybe-uninitialized]
4303 | return hypergeo(a1, bpar, c, z);
| ^~~~~~~~~~~~~~~~~~~~~~~~
Distributions.c: In function ‘PGrt_h2beta_core’:
Distributions.c:5598:27: note: ‘hseq_s.z’ was declared here
5598 | PGHypBSeq hseq_l, hseq_s;
| ^~~~~~
In function ‘pg_hyp_bseq_anchor’,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4510:15,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_h2beta_core’ at Distributions.c:5637:29:
Distributions.c:4470:56: warning: ‘hseq_s.a_int’ may be used uninitialized [-Wmaybe-uninitialized]
4470 | const int mpoly = st->a_int ? (l1 + st->a_int - 1) : -1;
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~
Distributions.c: In function ‘PGrt_h2beta_core’:
Distributions.c:5598:27: note: ‘hseq_s.a_int’ was declared here
5598 | PGHypBSeq hseq_l, hseq_s;
| ^~~~~~
In function ‘pg_hyp_bseq_get’,
inlined from ‘PGrt_h2beta_core’ at Distributions.c:5637:29:
Distributions.c:4500:8: warning: ‘hseq_s.enabled’ may be used uninitialized [-Wmaybe-uninitialized]
4500 | if (!st->enabled || l1 != st->last_l1 + 1) {
| ^
Distributions.c: In function ‘PGrt_h2beta_core’:
Distributions.c:5598:27: note: ‘hseq_s.enabled’ was declared here
5598 | PGHypBSeq hseq_l, hseq_s;
| ^~~~~~
In function ‘pg_hyp_bseq_get’,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_h2beta_core’ at Distributions.c:5637:29:
Distributions.c:4508:8: warning: ‘hseq_s.use_integral_seeds’ may be used uninitialized [-Wmaybe-uninitialized]
4508 | if ((st->use_integral_seeds ? (l1 < 2) : ((l1 % PG_HREC_BLOCK) < 2)) ||
| ^
Distributions.c: In function ‘PGrt_h2beta_core’:
Distributions.c:5598:27: note: ‘hseq_s.use_integral_seeds’ was declared here
5598 | PGHypBSeq hseq_l, hseq_s;
| ^~~~~~
In function ‘pg_hyp_bseq_get’,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_h2beta_core’ at Distributions.c:5637:29:
Distributions.c:4508:74: warning: ‘hseq_s.force_direct_next’ may be used uninitialized [-Wmaybe-uninitialized]
4508 | if ((st->use_integral_seeds ? (l1 < 2) : ((l1 % PG_HREC_BLOCK) < 2)) ||
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
4509 | st->force_direct_next || l1 < 2) {
| ~~~~~~~~~~~~~~~~~~~~~
Distributions.c: In function ‘PGrt_h2beta_core’:
Distributions.c:5598:27: note: ‘hseq_s.force_direct_next’ was declared here
5598 | PGHypBSeq hseq_l, hseq_s;
| ^~~~~~
In function ‘pg_hyp_bseq_get’,
inlined from ‘PGrt_h2beta_core’ at Distributions.c:5637:29:
Distributions.c:4500:43: warning: ‘hseq_s.last_l1’ may be used uninitialized [-Wmaybe-uninitialized]
4500 | if (!st->enabled || l1 != st->last_l1 + 1) {
| ~~~~~~~~~~~~^~~
Distributions.c: In function ‘PGrt_h2beta_core’:
Distributions.c:5598:27: note: ‘hseq_s.last_l1’ was declared here
5598 | PGHypBSeq hseq_l, hseq_s;
| ^~~~~~
In function ‘pg_hyp_bseq_get’,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_h2beta_core’ at Distributions.c:5637:29:
Distributions.c:4517:38: warning: ‘hseq_s.fm2’ may be used uninitialized [-Wmaybe-uninitialized]
4517 | + bcur*(st->z - 1.0) * st->fm2) / den;
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~
Distributions.c: In function ‘PGrt_h2beta_core’:
Distributions.c:5598:27: note: ‘hseq_s.fm2’ was declared here
5598 | PGHypBSeq hseq_l, hseq_s;
| ^~~~~~
In function ‘pg_hyp_bseq_get’,
inlined from ‘pg_hyp_bseq_get’ at Distributions.c:4495:24,
inlined from ‘PGrt_h2beta_core’ at Distributions.c:5637:29:
Distributions.c:4516:60: warning: ‘hseq_s.fm1’ may be used uninitialized [-Wmaybe-uninitialized]
4516 | val = -((2.0*bcur - st->c + (st->a1 - bcur)*st->z) * st->fm1
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
Distributions.c: In function ‘PGrt_h2beta_core’:
Distributions.c:5598:27: note: ‘hseq_s.fm1’ was declared here
5598 | PGHypBSeq hseq_l, hseq_s;
| ^~~~~~
In function ‘pg_beta_bseq_get’,
inlined from ‘pg_beta_bseq_get’ at Distributions.c:550:24,
inlined from ‘PG00’ at Distributions.c:5162:49:
Distributions.c:557:33: warning: ‘bj.p’ may be used uninitialized [-Wmaybe-uninitialized]
557 | st->logBeta += log(q) - log(st->p + q);
| ^~~~~~~~~~~~~~
Distributions.c: In function ‘PG00’:
Distributions.c:5149:24: note: ‘bj.p’ was declared here
5149 | PGBetaBSeq bi, bj;
| ^~
In function ‘pg_beta_bseq_get’,
inlined from ‘pg_beta_bseq_get’ at Distributions.c:550:24,
inlined from ‘PG00’ at Distributions.c:5162:49:
Distributions.c:554:22: warning: ‘bj.shape’ may be used uninitialized [-Wmaybe-uninitialized]
554 | const double q = st->shape + (double)st->last_l1;
| ^
Distributions.c: In function ‘PG00’:
Distributions.c:5149:24: note: ‘bj.shape’ was declared here
5149 | PGBetaBSeq bi, bj;
| ^~
In function ‘pg_beta_bseq_get’,
inlined from ‘pg_beta_bseq_get’ at Distributions.c:550:24,
inlined from ‘PG00’ at Distributions.c:5162:49:
Distributions.c:558:36: warning: ‘bj.log1mw’ may be used uninitialized [-Wmaybe-uninitialized]
558 | st->logDelta += st->log1mw + log(st->p + q) - log(q + 1.0);
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~
Distributions.c: In function ‘PG00’:
Distributions.c:5149:24: note: ‘bj.log1mw’ was declared here
5149 | PGBetaBSeq bi, bj;
| ^~
In function ‘pg_logspace_add_pos’,
inlined from ‘pg_beta_bseq_get’ at Distributions.c:555:20,
inlined from ‘pg_beta_bseq_get’ at Distributions.c:550:24,
inlined from ‘PG00’ at Distributions.c:5162:49:
Distributions.c:469:8: warning: ‘bj.logI’ may be used uninitialized [-Wmaybe-uninitialized]
469 | if (a == R_NegInf) return b;
| ^
Distributions.c: In function ‘PG00’:
Distributions.c:5149:24: note: ‘bj.logI’ was declared here
5149 | PGBetaBSeq bi, bj;
| ^~
In function ‘pg_logspace_add_pos’,
inlined from ‘pg_beta_bseq_get’ at Distributions.c:555:20,
inlined from ‘pg_beta_bseq_get’ at Distributions.c:550:24,
inlined from ‘PG00’ at Distributions.c:5162:49:
Distributions.c:470:8: warning: ‘bj.logDelta’ may be used uninitialized [-Wmaybe-uninitialized]
470 | if (b == R_NegInf) return a;
| ^
Distributions.c: In function ‘PG00’:
Distributions.c:5149:24: note: ‘bj.logDelta’ was declared here
5149 | PGBetaBSeq bi, bj;
| ^~
In function ‘pg_beta_bseq_get’,
inlined from ‘PG00’ at Distributions.c:5162:49:
Distributions.c:552:16: warning: ‘bj.last_l1’ may be used uninitialized [-Wmaybe-uninitialized]
552 | if (l1 < 0 || l1 < st->last_l1) return R_NaN;
| ~~~~~~~^~~~~~~~~~~~~~~~~~~
Distributions.c: In function ‘PG00’:
Distributions.c:5149:24: note: ‘bj.last_l1’ was declared here
5149 | PGBetaBSeq bi, bj;
| ^~
In function ‘pg_beta_bseq_get’,
inlined from ‘pg_beta_bseq_get’ at Distributions.c:550:24,
inlined from ‘PG00_positive’ at Distributions.c:4745:49,
inlined from ‘biv_PoissonGamma’ at Distributions.c:5788:28:
Distributions.c:557:33: warning: ‘bj.p’ may be used uninitialized [-Wmaybe-uninitialized]
557 | st->logBeta += log(q) - log(st->p + q);
| ^~~~~~~~~~~~~~
Distributions.c: In function ‘biv_PoissonGamma’:
Distributions.c:4727:24: note: ‘bj.p’ was declared here
4727 | PGBetaBSeq bi, bj;
| ^~
In function ‘pg_beta_bseq_get’,
inlined from ‘pg_beta_bseq_get’ at Distributions.c:550:24,
inlined from ‘PG00_positive’ at Distributions.c:4745:49,
inlined from ‘biv_PoissonGamma’ at Distributions.c:5788:28:
Distributions.c:558:36: warning: ‘bj.log1mw’ may be used uninitialized [-Wmaybe-uninitialized]
558 | st->logDelta += st->log1mw + log(st->p + q) - log(q + 1.0);
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~
Distributions.c: In function ‘biv_PoissonGamma’:
Distributions.c:4727:24: note: ‘bj.log1mw’ was declared here
4727 | PGBetaBSeq bi, bj;
| ^~
In function ‘pg_beta_bseq_get’,
inlined from ‘PG00_positive’ at Distributions.c:4745:49,
inlined from ‘biv_PoissonGamma’ at Distributions.c:5788:28:
Distributions.c:552:16: warning: ‘bj.last_l1’ may be used uninitialized [-Wmaybe-uninitialized]
552 | if (l1 < 0 || l1 < st->last_l1) return R_NaN;
| ~~~~~~~^~~~~~~~~~~~~~~~~~~
Distributions.c: In function ‘biv_PoissonGamma’:
Distributions.c:4727:24: note: ‘bj.last_l1’ was declared here
4727 | PGBetaBSeq bi, bj;
| ^~
In function ‘pg_logspace_add_pos’,
inlined from ‘pg_beta_bseq_get’ at Distributions.c:555:20,
inlined from ‘pg_beta_bseq_get’ at Distributions.c:550:24,
inlined from ‘PG00_positive’ at Distributions.c:4745:49,
inlined from ‘biv_PoissonGamma’ at Distributions.c:5788:28:
Distributions.c:469:8: warning: ‘bj.logI’ may be used uninitialized [-Wmaybe-uninitialized]
469 | if (a == R_NegInf) return b;
| ^
Distributions.c: In function ‘biv_PoissonGamma’:
Distributions.c:4727:24: note: ‘bj.logI’ was declared here
4727 | PGBetaBSeq bi, bj;
| ^~
In function ‘pg_logspace_add_pos’,
inlined from ‘pg_beta_bseq_get’ at Distributions.c:555:20,
inlined from ‘pg_beta_bseq_get’ at Distributions.c:550:24,
inlined from ‘PG00_positive’ at Distributions.c:4745:49,
inlined from ‘biv_PoissonGamma’ at Distributions.c:5788:28:
Distributions.c:470:8: warning: ‘bj.logDelta’ may be used uninitialized [-Wmaybe-uninitialized]
470 | if (b == R_NegInf) return a;
| ^
Distributions.c: In function ‘biv_PoissonGamma’:
Distributions.c:4727:24: note: ‘bj.logDelta’ was declared here
4727 | PGBetaBSeq bi, bj;
| ^~
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c DuplicateCoordinates.c -o DuplicateCoordinates.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c GeoBivDensity.c -o GeoBivDensity.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c GeoModels_init.c -o GeoModels_init.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c KrigSolve.c -o KrigSolve.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c PairCache.c -o PairCache.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c TB.c -o TB.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Utility.c -o Utility.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c clayton_gibbs.c -o clayton_gibbs.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c count_conditional_gibbs.c -o count_conditional_gibbs.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c covariance_series.c -o covariance_series.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gamma_gibbs.c -o gamma_gibbs.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c skewgaussian_gibbs.c -o skewgaussian_gibbs.o
gcc-16 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c weightedleastsquare.c -o weightedleastsquare.o
gcc-16 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o GeoModels.so 1F1.o 2F1.o 2F1_v2.o 2gammainc.o 2kummer.o CompositeLikelihood2.o CompositeLikelihood2_ani.o CompositeLikelihoodCond2.o CompositeLikelihoodCond2_ani.o CorrelationFunction.o Distributions.o DuplicateCoordinates.o GeoBivDensity.o GeoModels_init.o KrigSolve.o PairCache.o TB.o Utility.o clayton_gibbs.o count_conditional_gibbs.o covariance_series.o gamma_gibbs.o skewgaussian_gibbs.o weightedleastsquare.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpMDjpeS/R.INSTALL19bc80417cb67/GeoModels/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpMDjpeS/R.INSTALL19bc80417cb67/GeoModels/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpMDjpeS/R.INSTALL19bc80417cb67/GeoModels/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-GeoModels/00new/GeoModels/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘GeoModels’
finding HTML links ... done
Anomalies html
CheckBiv html
CheckDistance html
CheckST html
CheckSph html
CkCorrModel html
CkInput html
CkLikelihood html
CkModel html
CkType html
CompIndLik2 html
CompLik html
CompLik2 html
CorrParam html
CorrelationPar html
Corrsas html
GeoAniso html
GeoCV html
GeoCorrFct html
GeoCorrFct_Cop html
GeoCovDisplay html
GeoCovariogram html
GeoCovmatrix html
GeoDistances html
GeoDosocores html
GeoFit html
GeoFit2 html
GeoKrig html
GeoKrigWeights html
GeoKrigloc html
GeoKriglocWeights html
GeoModels-3D html
GeoModels-spacetime-ordering html
GeoNA html
GeoNeighIndex html
GeoNeighbSelect html
GeoNeighborhood html
GeoOutlier html
GeoPit html
GeoQQ html
GeoResiduals html
GeoScatterplot html
GeoScores html
GeoSim html
GeoSimCopula html
GeoSimapprox html
GeoSimcond html
GeoTestIndependence html
GeoTestIsotropy html
GeoTests html
GeoTestsupp_space html
GeoVarest html
GeoVarestbootstrap html
GeoVariogram html
GeoWls html
GeovariogramDir html
Lik html
MargParam html
MatDecomp html
Matrixfun html
NuisParam html
NuisParam2 html
SimCE html
StartParam html
WlsStart html
getInvC html
madagascartemp html
plot.GeoCorrFct html
plot.GeoVariogram html
plot.GeoVariogramDir html
rainNLD html
sp2Geo html
spanish_wind html
winds html
winds.coords html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GeoModels)