* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘GRIN2’ ... ** this is package ‘GRIN2’ version ‘2.0.0’ ** package ‘GRIN2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘GRIN2’ finding HTML links ... done KW.hit.express html alex.boxplots html alex.pathway html alex.prep.lsn.expr html alex.waterfall.plot html alex.waterfall.prep html clin_data html compute.gw.coordinates html count.hits html default.grin.colors html expr_data html find.gene.lsn.overlaps html genomewide.log10q.plot html genomewide.lsn.plot html get.chrom.length html get.ensembl.annotation html grin.assoc.lsn.outcome html grin.barplt html grin.lsn.boundaries html grin.oncoprint.mtx html grin.stats html grin.stats.lsn.plot html hg38_chrom_size html hg38_cytoband html hg38_gene_annotation html lesion_data html lsn.transcripts.plot html onco.print.props html order.index.gene.data html order.index.lsn.data html pathways html prep.binary.lsn.mtx html prep.gene.lsn.data html prep.lsn.type.matrix html prob.hits html top.alex.waterfall.plots html write.grin.xlsx html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GRIN2)