* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘GGIR’ ...
** this is package ‘GGIR’ version ‘3.3-0’
** package ‘GGIR’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘GGIR’
    finding HTML links ... done
    ABI                                     html  
    CalcSleepRegularityIndex                html  
    DFA                                     html  
    GGIR-package                            html  
    GGIR                                    html  
    HASIB                                   html  
    HASPT                                   html  
    MXLX                                    html  
    POSIXtime2iso8601                       html  
    SSP                                     html  
    ShellDoc2Vignette                       html  
    addSplitNames                           html  
    aggregateEvent                          html  
    appendRecords                           html  
    applyExtFunction                        html  
    apply_cosinor_IS_IV_Analyses            html  
    checkMilestoneFolders                   html  
    check_log                               html  
    check_myfun                             html  
    check_params                            html  
    convertEpochData                        html  
    correctOlderMilestoneData               html  
    cosinor_IS_IV_Analyses                  html  
    createConfigFile                        html  
    create_test_acc_csv                     html  
    create_test_sleeplog_csv                html  
    data.calibrate                          html  
    data.getmeta                            html  
    data.inspectfile                        html  
    data.metalong                           html  
    data.ts                                 html  
    datadir2fnames                          html  
    detect_nonwear_clipping                 html  
    extractID                               html  
    extract_params                          html  
    filterNonwearNight                      html  
    g.IVIS                                  html  
    g.abr.day.names                         html  
    g.analyse                               html  
    g.analyse.avday                         html  
    g.analyse.perday                        html  
    g.analyse.perfile                       html  
    g.applymetrics                          html  
    g.calibrate                             html  
    g.conv.actlog                           html  
    g.convert.part2.long                    html  
    g.create.sp.mat                         html  
    g.detecmidnight                         html  
    g.dotorcomma                            html  
    g.extractheadervars                     html  
    g.fragmentation                         html  
    g.getM5L5                               html  
    g.getbout                               html  
    g.getmeta                               html  
    g.getstarttime                          html  
    g.impute                                html  
    g.imputeTimegaps                        html  
    g.inspectfile                           html  
    g.intensitygradient                     html  
    g.loadlog                               html  
    g.part1                                 html  
    g.part2                                 html  
    g.part3                                 html  
    g.part3_alignIndexVectors               html  
    g.part3_correct_guider                  html  
    g.part4                                 html  
    g.part4_extradctid                      html  
    g.part5                                 html  
    g.part5.addfirstwake                    html  
    g.part5.addsib                          html  
    g.part5.analyseRest                     html  
    g.part5.definedays                      html  
    g.part5.fixmissingnight                 html  
    g.part5.handle_lux_extremes             html  
    g.part5.lux_persegment                  html  
    g.part5.ontsetwaketiming                html  
    g.part5.savetimeseries                  html  
    g.part5.wakesleepwindows                html  
    g.part5_analyseSegment                  html  
    g.part5_initialise_ts                   html  
    g.part6                                 html  
    g.plot                                  html  
    g.plot5                                 html  
    g.readaccfile                           html  
    g.readtemp_movisens                     html  
    g.report.part2                          html  
    g.report.part4                          html  
    g.report.part5                          html  
    g.report.part5_dictionary               html  
    g.report.part6                          html  
    g.shell.GGIR                            html  
    g.sib.det                               html  
    g.sib.plot                              html  
    g.sib.sum                               html  
    g.sibreport                             html  
    g.weardec                               html  
    getPart1BasicInfo                       html  
    getSplitNames                           html  
    get_nw_clip_block_params                html  
    get_starttime_weekday_truncdata         html  
    getfolderstructure                      html  
    identify_levels                         html  
    inspect_binFile_brand                   html  
    is.ISO8601                              html  
    is_this_a_dst_night                     html  
    isfilelist                              html  
    ismovisens                              html  
    iso8601chartime2POSIX                   html  
    load_params                             html  
    markerButtonForRest                     html  
    parametersVignette                      html  
    part6AlignIndividuals                   html  
    part6PairwiseAggregation                html  
    read.myacc.csv                          html  
    splitRecords                            html  
    tidyup_df                               html  
    updateBlocksize                         html  
    visualReport                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GGIR)