* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘GEEaSPU’ ...
** package ‘GEEaSPU’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/RtmpHsAPgc/R.INSTALL29981460cf41ab/GEEaSPU/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c GEEaSPU.cpp -o GEEaSPU.o
GEEaSPU.cpp: In function ‘double count_if(arma::uvec)’:
GEEaSPU.cpp:24:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
   24 |     for(int i = 0; i < x.size(); i++) {
      |                    ~~^~~~~~~~~~
GEEaSPU.cpp: In function ‘Rcpp::List perm(arma::mat, arma::mat, arma::mat, int, int, int, arma::mat, arma::mat, int)’:
GEEaSPU.cpp:329:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  329 |     for (int j = 0; j < T0s.n_cols; j++) {
      |                     ~~^~~~~~~~~~~~
GEEaSPU.cpp: In function ‘Rcpp::List sim(int, arma::vec, arma::mat, arma::mat, arma::mat, arma::mat, arma::mat, int, int, int, int, arma::mat, arma::mat, int)’:
GEEaSPU.cpp:561:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  561 |     for (int j = 0; j < T0s.n_cols; j++) {
      |                     ~~^~~~~~~~~~~~
GEEaSPU.cpp: In function ‘Rcpp::List permpath(arma::mat, arma::mat, arma::mat, arma::vec, int, int, int, int, arma::mat, arma::mat, arma::mat, int)’:
GEEaSPU.cpp:882:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  882 |     for (int j = 0; j < T0s.n_cols; j++) {
      |                     ~~^~~~~~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o GEEaSPU.so GEEaSPU.o RcppExports.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpHsAPgc/R.INSTALL29981460cf41ab/GEEaSPU/src'
make[1]: Entering directory '/tmp/RtmpHsAPgc/R.INSTALL29981460cf41ab/GEEaSPU/src'
make[1]: Leaving directory '/tmp/RtmpHsAPgc/R.INSTALL29981460cf41ab/GEEaSPU/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-GEEaSPU/00new/GEEaSPU/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘GEEaSPU’
    finding HTML links ... done
    GEEaSPU-package                         html  
    GEEaSPU                                 html  
    GEEaSPUpath                             html  
    GEEaSPUset                              html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GEEaSPU)