* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘FRESA.CAD’ ...
** package ‘FRESA.CAD’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpSYUxrM/R.INSTALL15f37358936445/FRESA.CAD/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c FRESACAD_init.cpp -o FRESACAD_init.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c FRESAcommons.cpp -o FRESAcommons.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c binaryFeatureSelectionCpp.cpp -o binaryFeatureSelectionCpp.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c rankInverseNormalCpp.cpp -o rankInverseNormalCpp.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c regresionFeatureSelectionCpp.cpp -o regresionFeatureSelectionCpp.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o FRESA.CAD.so FRESACAD_init.o FRESAcommons.o binaryFeatureSelectionCpp.o rankInverseNormalCpp.o regresionFeatureSelectionCpp.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpSYUxrM/R.INSTALL15f37358936445/FRESA.CAD/src'
make[1]: Entering directory '/tmp/RtmpSYUxrM/R.INSTALL15f37358936445/FRESA.CAD/src'
make[1]: Leaving directory '/tmp/RtmpSYUxrM/R.INSTALL15f37358936445/FRESA.CAD/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-FRESA.CAD/00new/FRESA.CAD/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘FRESA.CAD’
finding HTML links ... done
BESS html
BSWiMS html
CV_signature html
CalibratedPrediction html
CancerVarNames html
ClustClass html
CoxRiskCalibration html
EmpiricalSurvDiff html
FRESA.CAD-package html
FRESA.Model html
FRESAScale html
FilterUnivariate html
Filter_mRMR html
ForwardModel.Bin html
ForwardModel.Res html
GMVEBSWiMS html
GMVECluster html
HCLAS_KNN_CLASS html
IterartiveDecorrelation html
KNN_method html
LASSO_MIN html
LM_RIDGE_MIN html
NAIVE_BAYES html
RRPlot html
TUNED_SVM html
backVarElimination.Bin html
backVarElimination.Res html
baggedModel html
barPlotCiError html
benchmarking html
bootstrapValidation.Bin html
bootstrapValidation.Res html
bootstrapVarElimination.Bin html
bootstrapVarElimination.Res html
ciStats html
clusterISODATA html
crossValidationFeatureSelection.Bin html
crossValidationFeatureSelection.Res html
ensemblePredict html
featureAdjustment html
filteredFit html
getDerivedCoefficients html
getKNNpredictionFromFormula html
getSignature html
getVar.Bin html
getVar.Res html
heatMaps html
improvedResiduals html
jaccardMatrix html
listTopCorrelatedVariables html
modelFitting html
nearestCentroid html
nearestneighborimpute html
plot.FRESABenchmark html
plot.bootstrapValidation.Bin html
plot.bootstrapValidation.Res html
plotModels.ROC html
poissonProbs html
predict.CLUSTER_CLASS html
predict.FRESAKNN html
predict.FRESA_BOOST html
predict.FRESA_FILTERFIT html
predict.FRESA_LASSO html
predict.FRESA_NAIVEBAYES html
predict.FRESA_RIDGE html
predict.FRESA_SVM html
predict.FRESAsignature html
predict.GMVE html
predict.GMVE_BSWiMS html
predict.bess html
predictForFresa html
predictionStats html
randomCV html
rankInverseNormalDataFrame html
reportEquivalentVariables html
residualForFRESA html
signatureDistance html
summary.bootstrapValidation html
summary.fitFRESA html
summaryReport html
timeSeriesAnalysis html
trajectoriesPolyFeatures html
uniRankVar html
univariateRankVariables html
update.uniRankVar html
updateModel.Bin html
updateModel.Res html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (FRESA.CAD)