* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘Epi’ ...
** package ‘Epi’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/RtmpG03Y9T/R.INSTALL3304742e48897c/Epi/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c chinv2.c -o chinv2.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cholesky2.c -o cholesky2.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c chsolve2.c -o chsolve2.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c clogit.c -o clogit.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o Epi.so chinv2.o cholesky2.o chsolve2.o clogit.o init.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpG03Y9T/R.INSTALL3304742e48897c/Epi/src'
make[1]: Entering directory '/tmp/RtmpG03Y9T/R.INSTALL3304742e48897c/Epi/src'
make[1]: Leaving directory '/tmp/RtmpG03Y9T/R.INSTALL3304742e48897c/Epi/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-Epi/00new/Epi/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘Epi’
finding HTML links ... done
AaJ.Lexis html
B.dk html
BrCa html
DMconv html
DMepi html
DMlate html
Epi html
Icens html
LCa.fit html
Lexis html
Lexis.diagram html
Lexis.lines html
Lexis2msm html
Life.lines html
M.dk html
N.dk html
N2Y html
NArray html
Ns html
ROC html
Relevel html
S.typh html
Termplot html
Y.dk html
addCov.Lexis html
addDrug.Lexis html
apc.LCa html
apc.fit html
apc.frame html
bdendo html
births html
blcaIT html
bootLexis html
boxes.MS html
brv html
cal.yr html
ccwc html
ci.Crisk html
ci.cum html
ci.lin html
ci.pd html
clogistic html
contr.cum html
crr.Lexis html
cutLexis html
detrend html
diet html
effx html
effx.match html
erl html
ewrates html
expand.data html
fit.add html
fit.baseline html
fit.mult html
float html
foreign.Lexis html
ftrend html
gen.exp html
gmortDK html
harm html
hivDK html
in.span html
legendbox html
lep html
lgrep html
lines.apc html
lls html
lungDK html
mat2pol html
matshade html
mcutLexis html
merge.Lexis html
mh html
mod.Lexis html
mortDK html
ncut html
nice html
nickel html
occup html
pc.lines html
pctab html
plot.Lexis html
plot.apc html
plotCIF html
plotEst html
plotevent html
poisreg html
pr html
projection.ip html
rateplot html
rbind.Lexis html
rcutLexis html
rm.tr html
simLexis html
splitLexis html
stack.Lexis html
start.Lexis html
stattable html
stattable.funs html
steno2 html
subset.Lexis html
summary.Lexis html
testisDK html
thoro html
time.band html
time.scales html
transform.Lexis html
twoby2 html
unLexis html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Epi)