* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘EMbC’ ...
** package ‘EMbC’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/RtmpQRr821/R.INSTALL2f607429c7a528/EMbC/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c mvbc.cpp -o mvbc.o
mvbc.cpp: In function ‘Rcpp::NumericVector getClusters_cpp(arma::mat, arma::mat, arma::mat, arma::mat)’:
mvbc.cpp:58:48: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
   58 |                                 for (int k=0; k<w.n_elem; ++k){
      |                                               ~^~~~~~~~~
mvbc.cpp: In function ‘arma::mat dens2wght_cpp(arma::mat)’:
mvbc.cpp:81:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
   81 |         for(int i=0; i<L.n_rows; ++i){
      |                      ~^~~~~~~~~
mvbc.cpp: In function ‘double getLkh_cpp(arma::mat)’:
mvbc.cpp:92:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
   92 |         for(int i=0; i<L.n_rows; ++i){
      |                      ~^~~~~~~~~
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o EMbC.so RcppExports.o mvbc.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpQRr821/R.INSTALL2f607429c7a528/EMbC/src'
make[1]: Entering directory '/tmp/RtmpQRr821/R.INSTALL2f607429c7a528/EMbC/src'
make[1]: Leaving directory '/tmp/RtmpQRr821/R.INSTALL2f607429c7a528/EMbC/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-EMbC/00new/EMbC/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘EMbC’
    finding HTML links ... done
    EMbC_pckg                               html  
    binClst-class                           html  
    binClstPath-class                       html  
    binClstPath_Instance                    html  
    binClstStck-class                       html  
    binClst_Instance                        html  
    bkml                                    html  
    bmap                                    html  
    chkp                                    html  
    cnfm                                    html  
    embc                                    html  
    expth                                   html  
    lblp                                    html  
    lkhp                                    html  
    pkml                                    html  
    pmap                                    html  
    rlbl                                    html  
    sct3                                    html  
    sctr                                    html  
    setc                                    html  
    slct                                    html  
    smth                                    html  
    stbc                                    html  
    stts                                    html  
    varp                                    html  
    view                                    html  
    x2d                                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (EMbC)