* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘EGRET’ ...
** package ‘EGRET’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘EGRET’
    finding HTML links ... done
    Constants                               html  
    EGRET-package                           html  
    INFOdataframe                           html  
    as.egret                                html  
    blankTime                               html  
    boxConcMonth                            html  
    boxConcThree                            html  
    boxQTwice                               html  
    boxResidMonth                           html  
    calculateMonthlyResults                 html  
    censoredSegments                        html  
    checkStartEndDate                       html  
    checkSurfaceSpan                        html  
    cleanUp                                 html  
    compressData                            html  
    concUnit-class                          html  
    cumQdate                                html  
    dataOverview                            html  
    dateFormatCheck                         html  
    decimalDate                             html  
    decimalHighLow                          html  
    errorStats                              html  
    estCrossVal                             html  
    estDailyFromSurfaces                    html  
    estSurfaces                             html  
    fixSampleFrame                          html  
    flexFN                                  html  
    flexPlotAddOn                           html  
    flowDuration                            html  
    fluxBiasMulti                           html  
    fluxBiasStat                            html  
    fluxUnit-class                          html  
    generalAxis                             html  
    genericEGRETDotPlot                     html  
    genmissing                              html  
    getDaily                                html  
    getInfo                                 html  
    getSample                               html  
    getSurfaces                             html  
    helperEGRET                             html  
    is.egret                                html  
    jitterSam                               html  
    logPretty1                              html  
    logPretty3                              html  
    makeAnnualSeries                        html  
    makeAugmentedSample                     html  
    makeDateInfo                            html  
    mergeReport                             html  
    modelEstimation                         html  
    monthLabel-class                        html  
    multiPlotDataOverview                   html  
    plot15                                  html  
    plot1of15                               html  
    plotConcHist                            html  
    plotConcPred                            html  
    plotConcQ                               html  
    plotConcQSmooth                         html  
    plotConcTime                            html  
    plotConcTimeDaily                       html  
    plotConcTimeSmooth                      html  
    plotContours                            html  
    plotDiffContours                        html  
    plotFlowSingle                          html  
    plotFluxHist                            html  
    plotFluxPred                            html  
    plotFluxQ                               html  
    plotFluxTimeDaily                       html  
    plotFour                                html  
    plotFourStats                           html  
    plotMonthTrend                          html  
    plotQTimeDaily                          html  
    plotResidPred                           html  
    plotResidQ                              html  
    plotResidTime                           html  
    plotSDLogQ                              html  
    plotTimeSlice                           html  
    plotWRTDSKalman                         html  
    populateConcentrations                  html  
    populateDaily                           html  
    populateDailySamp                       html  
    populateDateColumns                     html  
    populateParameterINFO                   html  
    populateSampleColumns                   html  
    populateSiteINFO                        html  
    printFluxUnitCheatSheet                 html  
    printGroups                             html  
    printPairs                              html  
    printSeries                             html  
    printqUnitCheatSheet                    html  
    processQWData                           html  
    qUnit-class                             html  
    randomSubset                            html  
    readDataFromFile                        html  
    readNWISDaily                           html  
    readNWISSample                          html  
    readUserDaily                           html  
    readUserSample                          html  
    readWQPSample                           html  
    removeDuplicates                        html  
    runGroups                               html  
    runPairs                                html  
    runSeries                               html  
    runSurvReg                              html  
    sampleData                              html  
    saveResults                             html  
    selectDays                              html  
    setPA                                   html  
    setSeasonLabel                          html  
    setSeasonLabelByUser                    html  
    setUpEstimation                         html  
    setupYears                              html  
    startEnd                                html  
    stitch                                  html  
    surfaceIndex                            html  
    surfaceStartEnd                         html  
    tableChange                             html  
    tableFlowChange                         html  
    tableResults                            html  
    triCube                                 html  
    wrtdsK                                  html  
    yPretty                                 html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path