* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘EFAtools’ ...
** this is package ‘EFAtools’ version ‘0.7.1’
** package ‘EFAtools’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-15 (Debian 15.2.0-17) 15.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpRPl9kp/R.INSTALL3db5234f9dae4e/EFAtools/src'
g++-15 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-15 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c factor_corres.cpp -o factor_corres.o
g++-15 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c ml_helper.cpp -o ml_helper.o
g++-15 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c nest_sym.cpp -o nest_sym.o
nest_sym.cpp: In function ‘arma::vec nest_sym(int, int, arma::mat, int)’:
nest_sym.cpp:29:24: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘const int’ [-Wsign-compare]
29 | for (uword i = 0; i < nreps; i++) {
| ~~^~~~~~~
g++-15 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c oblique_procrustes.cpp -o oblique_procrustes.o
oblique_procrustes.cpp: In function ‘FitResult run_single_oblique_fit(const arma::mat&, const arma::mat&, double, arma::mat, double, int, int, double)’:
oblique_procrustes.cpp:181:22: warning: unused variable ‘k’ [-Wunused-variable]
181 | const unsigned int k = Tmat.n_cols;
| ^
g++-15 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c paf_iter.cpp -o paf_iter.o
g++-15 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c parallel.cpp -o parallel.o
parallel.cpp: In function ‘arma::mat parallel_sim(int, int, int, int, int)’:
parallel.cpp:31:25: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘const int’ [-Wsign-compare]
31 | for (uword i = 0; i < n_datasets; i++) {
| ~~^~~~~~~~~~~~
g++-15 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c uls_helper.cpp -o uls_helper.o
g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o EFAtools.so RcppExports.o factor_corres.o ml_helper.o nest_sym.o oblique_procrustes.o paf_iter.o parallel.o uls_helper.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpRPl9kp/R.INSTALL3db5234f9dae4e/EFAtools/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpRPl9kp/R.INSTALL3db5234f9dae4e/EFAtools/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpRPl9kp/R.INSTALL3db5234f9dae4e/EFAtools/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-EFAtools/00new/EFAtools/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘EFAtools’
finding HTML links ... done
BARTLETT html
CD html
COMPARE html
CONSENSUS_PROCRUSTES html
DOSPERT html
DOSPERT_raw html
EFA html
EFA_AVERAGE html
EFA_POOLED html
EFAtools-package html
EKC html
FACTOR_SCORES html
GRiPS_raw html
HULL html
IDS2_R html
KGC html
KMO html
MAP html
NEST html
N_FACTORS html
OMEGA html
PARALLEL html
PROCRUSTES html
RiskDimensions html
SCREE html
SL html
SMT html
SPSS_23 html
SPSS_27 html
UPPS_raw html
WJIV_ages_14_19 html
WJIV_ages_20_39 html
WJIV_ages_3_5 html
WJIV_ages_40_90 html
WJIV_ages_6_8 html
WJIV_ages_9_13 html
dot-average_matrices html
dot-calc_cis html
dot-change_class html
dot-compute_vars html
dot-consensus_loss html
dot-consensus_target_procrustes_single
html
dot-extract_list_object html
dot-factor_corres html
dot-hyperplane_count html
dot-nest_sym html
dot-numformat html
dot-oblique_procrustes html
dot-orthogonal_procrustes html
dot-paf_iter html
dot-parallel_sim html
dot-stat_over_list html
dot-tucker_congruence html
pipe html
plot.CD html
plot.EFA_AVERAGE html
plot.EKC html
plot.HULL html
plot.KGC html
plot.PARALLEL html
plot.SCREE html
population_models html
print.BARTLETT html
print.CD html
print.COMPARE html
print.EFA html
print.EFA_AVERAGE html
print.EKC html
print.HULL html
print.KGC html
print.KMO html
print.LOADINGS html
print.MAP html
print.NEST html
print.N_FACTORS html
print.OMEGA html
print.PARALLEL html
print.SCREE html
print.SL html
print.SLLOADINGS html
print.SMT html
residuals.EFA html
test_models html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (EFAtools)