* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘DepLogo’ ...
** this is package ‘DepLogo’ version ‘1.2.2’
** package ‘DepLogo’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘DepLogo’
    finding HTML links ... done
    Alphabet                                html  
    DLData                                  html  
    alphabet.dna                            html  
    alphabet.dna.gap                        html  
    alphabet.protein                        html  
    alphabet.protein.gap                    html  
    alphabet.rna                            html  
    alphabet.rna.gap                        html  
    colorchart                              html  
    deprects                                html  
    filter.by.conservation                  html  
    filter.by.dependencies                  html  
    filter.by.gaps                          html  
    filterColumns                           html  
    getDeps                                 html  
    getPWM                                  html  
    logo                                    html  
    partition                               html  
    plotBlocks                              html  
    plotDeparcs                             html  
    plotDeplogo                             html  
    plotDepmatrix                           html  
    replaceColors                           html  
    revcom                                  html  
    subBoxes                                html  
    subLines                                html  
    suggestColors                           html  
    summary.DLData                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (DepLogo)