* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘CspStandSegmentation’ ... ** this is package ‘CspStandSegmentation’ version ‘0.1.2’ ** package ‘CspStandSegmentation’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpheSWEK/R.INSTALL78af0261a1cfd/CspStandSegmentation/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lidR/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -DRCPP_NO_MODULES -DWITHSETLENGTH -fpic -g -O2 -Wall -pedantic -mtune=native -c 2021-11-12_A1_JF_csp_cost_cpp_functions.cpp -o 2021-11-12_A1_JF_csp_cost_cpp_functions.o In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lidR/include/SpatialIndex.h:6, from 2021-11-12_A1_JF_csp_cost_cpp_functions.cpp:6: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lidR/include/lidR/SparsePartition.h: In member function ‘void lidR::SparsePartition3D::knn(const lidR::PointXY&, unsigned int, std::vector >&)’: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lidR/include/lidR/SparsePartition.h:166:39: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 166 | while (pts.size() < k && pts.size() < npoints) | ~~~~~~~~~~~^~~~~~~~~ /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lidR/include/lidR/SparsePartition.h: In member function ‘void lidR::SparsePartition3D::knn(const lidR::PointXY&, unsigned int, double, std::vector >&)’: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lidR/include/lidR/SparsePartition.h:193:41: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 193 | while (pts.size() < k && pts.size() < npoints && radius <= maxradius) { | ~~~~~~~~~~~^~~~~~~~~ /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lidR/include/lidR/SparsePartition.h: In member function ‘void lidR::SparsePartition3D::knn(const lidR::PointXYZ&, unsigned int, std::vector >&)’: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lidR/include/lidR/SparsePartition.h:223:39: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 223 | while (pts.size() < k && pts.size() < npoints) { | ~~~~~~~~~~~^~~~~~~~~ /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lidR/include/lidR/SparsePartition.h: In member function ‘void lidR::SparsePartition3D::knn(const lidR::PointXYZ&, unsigned int, double, std::vector >&)’: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lidR/include/lidR/SparsePartition.h:248:41: warning: comparison of integer expressions of different signedness: ‘std::vector >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 248 | while (pts.size() < k && pts.size() < npoints && radius <= maxradius) | ~~~~~~~~~~~^~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/lidR/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -DRCPP_NO_MODULES -DWITHSETLENGTH -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o CspStandSegmentation.so 2021-11-12_A1_JF_csp_cost_cpp_functions.o RcppExports.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpheSWEK/R.INSTALL78af0261a1cfd/CspStandSegmentation/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpheSWEK/R.INSTALL78af0261a1cfd/CspStandSegmentation/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpheSWEK/R.INSTALL78af0261a1cfd/CspStandSegmentation/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-CspStandSegmentation/00new/CspStandSegmentation/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘CspStandSegmentation’ finding HTML links ... done add_geometry html add_las_attributes html add_voxel_coordinates html comparative_shortest_path html csp_cost_segmentation html eigen_decomposition html fast_unlist html fast_unlist_dist html fds html find_base_coordinates_geom html find_base_coordinates_raster html forest_inventory html forest_inventory_simple html las_merge html p_dist html p_mat_dist html plot_inventory html point_center_angle html point_circle_distance html ransac_circle_fit html suppress_cat html voxelize_points_mean_attributes html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CspStandSegmentation)