* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘CodelistGenerator’ ...
** this is package ‘CodelistGenerator’ version ‘3.5.0’
** package ‘CodelistGenerator’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘CodelistGenerator’
    finding HTML links ... done
    CodelistGenerator-package               html  
    ageGroupDoc                             html  
    availableATC                            html  
    availableICD10                          html  
    availableIngredients                    html  
    buildAchillesTables                     html  
    byConceptDoc                            html  
    bySexDoc                                html  
    byYearDoc                               html  
    cdmDoc                                  html  
    codesFromCohort                         html  
    codesFromConceptSet                     html  
    codesInUse                              html  
    compareCodelists                        html  
    countByDoc                              html  
    domainDoc                               html  
    doseFormDoc                             html  
    doseUnitDoc                             html  
    dot-optionsDoc                          html  
    getATCCodes                             html  
    getCandidateCodes                       html  
    getConceptClassId                       html  
    getDescendants                          html  
    getDomains                              html  
    getDoseForm                             html  
    getDoseUnit                             html  
    getDrugIngredientCodes                  html  
    getICD10StandardCodes                   html  
    getMappings                             html  
    getRelationshipId                       html  
    getRouteCategories                      html  
    getVocabVersion                         html  
    getVocabularies                         html  
    groupColumnDoc                          html  
    groupColumnStrataDoc                    html  
    headerDoc                               html  
    headerStrataDoc                         html  
    hideDoc                                 html  
    hideStrataDoc                           html  
    includeDescendantsDoc                   html  
    ingredientRangeDoc                      html  
    keepOriginalDoc                         html  
    levelATCDoc                             html  
    levelICD10Doc                           html  
    minimumCountDoc                         html  
    mockVocabRef                            html  
    nameStyleDoc                            html  
    reexports                               html  
    routeCategoryDoc                        html  
    sourceCodesInUse                        html  
    standardConceptDoc                      html  
    stratifyByConcept                       html  
    stratifyByDoseUnit                      html  
    stratifyByRouteCategory                 html  
    subsetOnDomain                          html  
    subsetOnDoseUnit                        html  
    subsetOnRouteCategory                   html  
    subsetToCodesInUse                      html  
    summariseAchillesCodeUse                html  
    summariseCodeUse                        html  
    summariseCohortCodeUse                  html  
    summariseOrphanCodes                    html  
    summariseUnmappedCodes                  html  
    tableAchillesCodeUse                    html  
    tableCodeUse                            html  
    tableCohortCodeUse                      html  
    tableDoc                                html  
    tableOrphanCodes                        html  
    tableUnmappedCodes                      html  
    typeBroadDoc                            html  
    typeNarrowDoc                           html  
    typeTableDoc                            html  
    xDoc                                    html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CodelistGenerator)