* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘ClustAssess’ ...
** package ‘ClustAssess’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpTR016V/R.INSTALLe851c2bccca36/ClustAssess/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c calculate_pac.cpp -o calculate_pac.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c update_connectivity.cpp -o update_connectivity.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o ClustAssess.so RcppExports.o calculate_pac.o update_connectivity.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpTR016V/R.INSTALLe851c2bccca36/ClustAssess/src'
make[1]: Entering directory '/tmp/RtmpTR016V/R.INSTALLe851c2bccca36/ClustAssess/src'
make[1]: Leaving directory '/tmp/RtmpTR016V/R.INSTALLe851c2bccca36/ClustAssess/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-ClustAssess/00new/ClustAssess/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘ClustAssess’
    finding HTML links ... done
    Clustering-class                        html  
    consensus_cluster                       html  
    create_clustering                       html  
    element_agreement                       html  
    element_consistency                     html  
    element_sim                             html  
    element_sim_elscore                     html  
    element_sim_matrix                      html  
    get_clustering_difference               html  
    get_feature_stability                   html  
    get_nn_conn_comps                       html  
    get_nn_importance                       html  
    get_resolution_importance               html  
    length-Clustering-method                html  
    marker_overlap                          html  
    merge_partitions                        html  
    merge_resolutions                       html  
    pac_convergence                         html  
    pac_landscape                           html  
    pipe                                    html  
    plot_clustering_difference_boxplot      html  
    plot_clustering_difference_facet        html  
    plot_connected_comps_evolution          html  
    plot_feature_stability_boxplot          html  
    plot_feature_stability_ecs_facet        html  
    plot_feature_stability_ecs_incremental
                                            html  
    plot_feature_stability_mb_facet         html  
    plot_k_n_partitions                     html  
    plot_k_resolution_corresp               html  
    plot_n_neigh_ecs                        html  
    plot_n_neigh_k_correspondence           html  
    print-Clustering-method                 html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ClustAssess)