* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘CNVScope’ ...
** this is package ‘CNVScope’ version ‘3.7.2’
** package ‘CNVScope’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘CNVScope’
    finding HTML links ... done
    CNVScopeserver                          html  
    GRanges_to_underscored_pos              html  
    averageMatrixEdges                      html  
    calcCNVKernelProbDist                   html  
    calcVecLMs                              html  
    createChromosomalMatrixSet              html  
    divisors                                html  
    downsample_genomic_matrix               html  
    extractNegLogPval                       html  
    formSampleMatrixFromRawGDCData          html  
    freadGDCfile                            html  
    getAnnotationMatrix                     html  
    getAsymmetricBlockIndices               html  
    getBlockAverageMatrixFromBreakpoints    html  
    getGlobalRescalingStats                 html  
    getInterchromosomalInteractivePlot      html  
    importBreakpointBed                     html  
    mathead                                 html  
    nbl_result_matrix_sign_small            html  
    postProcessLinRegMatrix                 html  
    rebinGenomicInteractions                html  
    runCNVScopeLocal                        html  
    runCNVScopeShiny                        html  
    signedRescale                           html  
    underscored_pos_to_GRanges              html  
    writeAsymmetricMeltedChromosomalMatrixToDisk
                                            html  
    writeMeltedChromosomalMatrixToDisk      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CNVScope)