* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘CNSigs’ ... ** this is package ‘CNSigs’ version ‘0.1.0’ ** package ‘CNSigs’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘CNSigs’ finding HTML links ... done addPloidyData html cancerComps html cancerSigs html checkCompOverlap html collapsedSigs html compareExposures html compsExp html createSigs html defaultFeats html detSigNumPipeline html determineNumSigs html diffCompSigSim html extractCNFeats html featsExp html featureFuncs html findExposures html fitComponent html fitModels html generateSCM html matchSigs html plotComp html plotComps html plotScm html plotSegs html plotSig html plotSigExposure html plotSigExposureMat html plotSigMat html plotSigs html postProb html readSegs html reducePeaks html referenceExp html remapResults html runPipeline html scmExp html segDataExp html segStats html sigExposExp html sigSim html sigsExp html smoothSegs html sumOfPosteriors html validateSegData html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CNSigs)