* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘CGManalyzer’ ...
** package ‘CGManalyzer’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-24) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp80HaSi/R.INSTALL1bfb925d29bbd1/CGManalyzer/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c main.c -o main.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c mseLong.c -o mseLong.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o CGManalyzer.so main.o mseLong.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp80HaSi/R.INSTALL1bfb925d29bbd1/CGManalyzer/src'
make[1]: Entering directory '/tmp/Rtmp80HaSi/R.INSTALL1bfb925d29bbd1/CGManalyzer/src'
make[1]: Leaving directory '/tmp/Rtmp80HaSi/R.INSTALL1bfb925d29bbd1/CGManalyzer/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-CGManalyzer/00new/CGManalyzer/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘CGManalyzer’
    finding HTML links ... done
    CGManalyzer-package                     html  
    CONGA.fn                                html  
    MODD.fn                                 html  
    MSEbyC.fn                               html  
    MSEplot.fn                              html  
    antennaPlot.fn                          html  
    boxplotCGM.fn                           html  
    equalInterval.fn                        html  
    fac2char.fn                             html  
    fixMissing.fn                           html  
    pairwiseComparison.fn                   html  
    plotTseries.fn                          html  
    setSPEC.fn                              html  
    ssmdEffect.fn                           html  
    summaryCGM.fn                           html  
    timeSeqConversion.fn                    html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘CGManalyzer’ as ‘CGManalyzer_1.3.1_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (CGManalyzer)