* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘CEGO’ ...
** package ‘CEGO’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/RtmpPSuXxb/R.INSTALL2c8e252b5477e5/CEGO/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c numericDistance.c -o numericDistance.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c permutationDistance.c -o permutationDistance.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c stringDistance.c -o stringDistance.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o CEGO.so init.o numericDistance.o permutationDistance.o stringDistance.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpPSuXxb/R.INSTALL2c8e252b5477e5/CEGO/src'
make[1]: Entering directory '/tmp/RtmpPSuXxb/R.INSTALL2c8e252b5477e5/CEGO/src'
make[1]: Leaving directory '/tmp/RtmpPSuXxb/R.INSTALL2c8e252b5477e5/CEGO/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-CEGO/00new/CEGO/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘CEGO’
finding HTML links ... done
CEGO-package html
benchmarkGeneratorFSP html
benchmarkGeneratorMaxCut html
benchmarkGeneratorNKL html
benchmarkGeneratorQAP html
benchmarkGeneratorTSP html
benchmarkGeneratorWT html
buildModel html
combinatorialLM html
combinatorialRBFN html
computeCorrelationMatrix html
correctionAugmentedDistanceVector html
correctionAugmentedKernelVector html
correctionCNSD html
correctionDefinite html
correctionDistanceMatrix html
correctionKernelMatrix html
createSimulatedTestFunction html
designMaxMinDist html
designRandom html
distanceMatrix html
distanceMatrixUpdate html
distanceMatrixWrapper html
distanceNumericHamming html
distanceNumericLCStr html
distanceNumericLevenshtein html
distancePermutationAdjacency html
distancePermutationChebyshev html
distancePermutationCos html
distancePermutationEuclidean html
distancePermutationHamming html
distancePermutationInsert html
distancePermutationInterchange html
distancePermutationLCStr html
distancePermutationLee html
distancePermutationLevenshtein html
distancePermutationLex html
distancePermutationManhattan html
distancePermutationPosition html
distancePermutationPosition2 html
distancePermutationR html
distancePermutationSwap html
distancePermutationSwapInv html
distanceRealEuclidean html
distanceSequenceLevenshtein html
distanceStringHamming html
distanceStringLCStr html
distanceStringLevenshtein html
distanceVector html
fcorrCubic html
fcorrGauss html
fcorrLinear html
fcorrSphere html
infillExpectedImprovement html
is.CNSD html
is.NSD html
is.PSD html
kernelMatrix html
landscapeGeneratorGaussian html
landscapeGeneratorGaussianBuild html
landscapeGeneratorGaussianEval html
landscapeGeneratorMUL html
landscapeGeneratorUNI html
lexicographicPermutationOrderNumber html
modelKriging html
modelKrigingClust html
modelKrigingDistanceCalculation html
modelKrigingInit html
modelKrigingInternalPredictor html
modelKrigingLikelihood html
modelKrigingParameterizedLikelihood html
modelLinear html
modelRBFN html
mutationBinaryBitFlip html
mutationBinaryBlockInversion html
mutationBinaryCycle html
mutationBinarySingleBitFlip html
mutationPermutationInsert html
mutationPermutationInterchange html
mutationPermutationInterchangeCore html
mutationPermutationReversal html
mutationPermutationSwap html
mutationSelfAdapt html
mutationStringRandomChange html
nearCNSD html
optim2Opt html
optimCEGO html
optimEA html
optimInterface html
optimMIES html
optimMaxMinDist html
optimRS html
optimizeModel html
predict.modelKriging html
predict.modelKrigingClust html
predict.modelLinear html
predict.modelRBFN html
print html
recombinationBinary1Point html
recombinationBinary2Point html
recombinationBinaryAnd html
recombinationBinaryUniform html
recombinationPermutationAlternatingPosition
html
recombinationPermutationCycleCrossover
html
recombinationPermutationOrderCrossover1
html
recombinationPermutationPositionBased html
recombinationSelfAdapt html
recombinationStringSinglePointCrossover
html
removeDuplicates html
removeDuplicatesOffspring html
repairConditionsCorrelationMatrix html
repairConditionsDistanceMatrix html
selfAdapt html
simulate.modelKriging html
solutionFunctionGeneratorBinary html
solutionFunctionGeneratorPermutation html
solutionFunctionGeneratorString html
step2Opt html
testFunctionGeneratorSim html
tournamentSelection html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CEGO)