* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘CAMAN’ ... ** package ‘CAMAN’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’ make[1]: Entering directory '/tmp/Rtmp2QGurH/R.INSTALL2884851e75e4d2/CAMAN/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c methods.cpp -o methods.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c vemema_vem.cpp -o vemema_vem.o vemema_vem.cpp: In member function ‘std::vector<std::vector<double> > VEMEMA::vem_bivariate(int, double)’: vemema_vem.cpp:1864:9: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 1864 | for(i=0;i<(int)p.size(); ++i) | ^~~ vemema_vem.cpp:1874:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 1874 | lambda.clear(); | ^~~~~~ g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o CAMAN.so methods.o vemema_vem.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/tmp/Rtmp2QGurH/R.INSTALL2884851e75e4d2/CAMAN/src' make[1]: Entering directory '/tmp/Rtmp2QGurH/R.INSTALL2884851e75e4d2/CAMAN/src' make[1]: Leaving directory '/tmp/Rtmp2QGurH/R.INSTALL2884851e75e4d2/CAMAN/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-CAMAN/00new/CAMAN/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘CAMAN’ finding HTML links ... done CT html NoP html PCT html anova.CAMAN.object html aspirin html betaplasma html bivariate.EM html bivariate.VEM html bivariate.mixalg html boot html getFDR html golubMerge html heage html hepab html hist.CAMAN.object html leukDat html mixalg.EM html mixalg html mixalg.VEM html mixalg.boot html mixcov html plots html rs12363681 html thai_cohort html vem_grad html vitamin html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CAMAN)