* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘BoutrosLab.plotting.general’ ...
** this is package ‘BoutrosLab.plotting.general’ version ‘7.1.2’
** package ‘BoutrosLab.plotting.general’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpA6aKch/R.INSTALL8ae3918b6111e/BoutrosLab.plotting.general/src'
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c distance.c -o distance.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ks.c -o ks.o
gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o BoutrosLab.plotting.general.so distance.o init.o ks.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpA6aKch/R.INSTALL8ae3918b6111e/BoutrosLab.plotting.general/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpA6aKch/R.INSTALL8ae3918b6111e/BoutrosLab.plotting.general/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpA6aKch/R.INSTALL8ae3918b6111e/BoutrosLab.plotting.general/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-BoutrosLab.plotting.general/00new/BoutrosLab.plotting.general/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘BoutrosLab.plotting.general’
finding HTML links ... done
CNA html
SNV html
auto.axis html
colour.gradient html
covariates.grob html
create.barplot html
create.boxplot html
create.colourkey html
create.dendrogram html
create.densityplot html
create.dotmap html
create.gif html
create.heatmap html
create.hexbinplot html
create.histogram html
create.lollipopplot html
create.manhattanplot html
create.multipanelplot html
create.multiplot html
create.polygonplot html
create.qqplot.comparison html
create.qqplot.fit html
create.qqplot.fit.confidence.interval html
create.scatterplot html
create.segplot html
create.stripplot html
create.violinplot html
critical.value.ks.test html
default.colours html
display.colours html
display.statistical.result html
dist html
force.colour.scheme html
generate.at.final html
get.corr.key html
get.correlation.p.and.corr html
get.defaults html
get.line.breaks html
legend.grob html
microarray html
panel.BL.bwplot html
patient html
pcawg.colours html
scientific.notation html
show.available.palettes html
thousands.split html
write.metadata html
write.plot html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BoutrosLab.plotting.general)