* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘BayesRTMB’ ... ** this is package ‘BayesRTMB’ version ‘0.2.1’ ** package ‘BayesRTMB’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘BayesRTMB’ finding HTML links ... done ADVI_method html BayesRTMB-package html BigFive html Classic_Fit html Dim html MAP_Fit html MCMC_Fit html RTMB_Fit_Base html RTMB_Model-class html VB_Fit html bayes_factor html bernoulli_logit_lpmf html bernoulli_lpmf html beta_lpdf html beverage html binomial_logit_lpmf html binomial_lpmf html bw_categorical_logit_lpmf html categorical_logit_lpmf html categorical_lpmf html cauchy_lpdf html centered_multi_normal_lpdf html centered_tri_multi_normal_lpdf html conditional_effects html conditional_effects.mcmc_fit html debate html dirichlet_lpdf html distance html distributions html env_to_ordered_list html ess_basic html ess_bulk html ess_tail95 html exponential_lpdf html fa_multi_normal_lpdf html fabs html fiml_multi_normal_CF_lpdf html fiml_multi_normal_fa_lpdf html gamma_lpdf html gaussian_process_lpdf html generate_random_init html half_normal_lpdf html inject_namespace html inv_logit html inverse_gamma_lpdf html item_curve.RTMB_Fit_Base html item_curve html item_info.RTMB_Fit_Base html item_info html laplace_lpdf html lkj_CF_corr_lpdf html lkj_corr_lpdf html log1m html log1m_exp html log1p_exp html log_det_chol html log_mix html log_softmax html log_sum_exp html log_sum_exp_matrix html logit html logit_normal_lpdf html lognormal_lpdf html lower_tri_normal_lpdf html lsmeans html make_bw_from_ydif html make_glmer_Z_matrix html make_glmer_re_terms html make_init_mdu html make_ydif_from_bw html map_est html math_functions html mixture_lpdf html multi_cauchy_lpdf html multi_normal_CF_lpdf html multi_normal_lpdf html multi_student_t_lpdf html multinomial_lpmf html neg_binomial_2_lpmf html neg_binomial_lpmf html normal_lpdf html normal_mixture_lpdf html ordered_logistic_lpmf html parameter_types html parameters_code html plot.ce_rtmb html plot.rtmb_lsmeans html plot_acf html plot_conditional_effects html plot_dens html plot_forest html plot_item_curve html plot_item_info html plot_lsmeans html plot_mdu html plot_pairs html plot_test_info html plot_trace html poisson_lpmf html positive_centered_tri_multi_normal_lpdf html positive_lower_tri_normal_lpdf html print.bayes_factor html print.bayes_factor_rtmb html print.ce_rtmb html print.ce_simple html print.summary_BayesRTMB html prior_flat html prior_jzs html prior_normal html prior_rhs html prior_ssp html prior_uniform html prior_weak html quad_form_chol html quad_form_diag html quantile95 html r_hat html read_mcmc_csv html rhat_summary html rtmb_array html rtmb_code html rtmb_corr html rtmb_fa html rtmb_glm html rtmb_glmer html rtmb_irt html rtmb_lm html rtmb_lmer html rtmb_loglinear html rtmb_lrt html rtmb_mdu html rtmb_mediation html rtmb_mixture html rtmb_model html rtmb_syntax html rtmb_table html rtmb_ttest html rtmb_vector html rtmb_wrappers html safe_rtmb_model html select_parameters html sequential_logistic_lpmf html simple_effects html simple_effects.mcmc_fit html softmax html sort_loadings html squared_distance html student_t_lpdf html stz_basis html sufficient_multi_normal_CF_lpdf html sufficient_multi_normal_fa_lpdf html sufficient_multi_normal_lpdf html sum_to_zero html summary.ce_rtmb html test_info html to_centered_matrix html to_centered_tri html to_long html to_lower_tri html to_wide html training html transform_code html uniform_lpdf html upgrade_fit html validate_data html weibull_lpdf html wishart_CF_lpdf html wishart_lpdf html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BayesRTMB)