* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘BayesPPDSurv’ ...
** this is package ‘BayesPPDSurv’ version ‘1.0.3’
** package ‘BayesPPDSurv’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2blfal/R.INSTALL16adee62d547c8/BayesPPDSurv/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c phm_fixed.cpp -o phm_fixed.o
phm_fixed.cpp: In function ‘Rcpp::List phm_fixed_a0(Rcpp::List&, Rcpp::List&, arma::vec&, arma::vec&, bool&, int, std::string, arma::vec, arma::vec, std::string, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, arma::vec, int, int, bool)’:
phm_fixed.cpp:385:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
  385 |     for(int s = 0; s < n_intervals0.size(); s++){
      |                    ~~^~~~~~~~~~~~~~~~~~~~~
phm_fixed.cpp:398:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
  398 |       for(int s = 0; s < n_intervals0.size(); s++){
      |                      ~~^~~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c phm_random.cpp -o phm_random.o
phm_random.cpp: In function ‘Rcpp::List phm_random_a0(Rcpp::List&, Rcpp::List&, arma::vec&, int, Rcpp::List&, arma::vec, arma::vec, arma::vec&, arma::vec&, arma::vec&, int, int)’:
phm_random.cpp:345:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
  345 |     for(int s = 0; s < n_intervals0.size(); s++){
      |                    ~~^~~~~~~~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c phm_random_prior.cpp -o phm_random_prior.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o BayesPPDSurv.so RcppExports.o phm_fixed.o phm_random.o phm_random_prior.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2blfal/R.INSTALL16adee62d547c8/BayesPPDSurv/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2blfal/R.INSTALL16adee62d547c8/BayesPPDSurv/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2blfal/R.INSTALL16adee62d547c8/BayesPPDSurv/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-BayesPPDSurv/00new/BayesPPDSurv/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘BayesPPDSurv’
    finding HTML links ... done
    BayesPPDSurv-package                    html  
    approximate.prior.beta                  html  
    melanoma                                html  
    phm.fixed.a0                            html  
    phm.random.a0                           html  
    power.phm.fixed.a0                      html  
    power.phm.random.a0                     html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BayesPPDSurv)