* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘BayesDLMfMRI’ ...
** package ‘BayesDLMfMRI’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-24) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-24) 13.2.0’
using C++17
make[1]: Entering directory '/tmp/Rtmpc6wmUC/R.INSTALL15075159d43c07/BayesDLMfMRI/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c GroupFunctionalBS.cpp -o GroupFunctionalBS.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c GroupFunctionalLTT.cpp -o GroupFunctionalLTT.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c GroupFunctionalMultivariate.cpp -o GroupFunctionalMultivariate.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c GroupFunctionalStateEquation.cpp -o GroupFunctionalStateEquation.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c IndividualBackwardsSampling.cpp -o IndividualBackwardsSampling.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c IndividualFunctionalLTT.cpp -o IndividualFunctionalLTT.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c IndividualFunctionalMultivariate.cpp -o IndividualFunctionalMultivariate.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c IndividualFunctionalStateEquation.cpp -o IndividualFunctionalStateEquation.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppDist/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
init.c:20:30: warning: ‘CallEntries’ defined but not used [-Wunused-const-variable=]
20 | static const R_CallMethodDef CallEntries[] = {
| ^~~~~~~~~~~
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o BayesDLMfMRI.so GroupFunctionalBS.o GroupFunctionalLTT.o GroupFunctionalMultivariate.o GroupFunctionalStateEquation.o IndividualBackwardsSampling.o IndividualFunctionalLTT.o IndividualFunctionalMultivariate.o IndividualFunctionalStateEquation.o RcppExports.o init.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpc6wmUC/R.INSTALL15075159d43c07/BayesDLMfMRI/src'
make[1]: Entering directory '/tmp/Rtmpc6wmUC/R.INSTALL15075159d43c07/BayesDLMfMRI/src'
make[1]: Leaving directory '/tmp/Rtmpc6wmUC/R.INSTALL15075159d43c07/BayesDLMfMRI/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-BayesDLMfMRI/00new/BayesDLMfMRI/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘BayesDLMfMRI’
finding HTML links ... done
BayesDLMfMRI html
Covariates html
GroupSingleVoxelFETS html
GroupSingleVoxelFFBS html
GroupSingleVoxelFSTS html
SingleVoxelFETS html
SingleVoxelFFBS html
SingleVoxelFSTS html
dot-check_ffdgroup html
dot-distanceNeighbors html
dot-ffdGroupVoxelFETS html
dot-ffdGroupVoxelFFBS html
dot-ffdGroupVoxelFSTS html
dot-ffdSingleVoxelFETS html
dot-ffdSingleVoxelFSTS html
dot-ffdsingleVoxelFFBS html
dot-get_n_cores html
dot-validate_input html
ffd html
ffdEvidenceFETS html
ffdEvidenceFFBS html
ffdEvidenceFSTS html
ffdGroupEvidenceFETS html
ffdGroupEvidenceFFBS html
ffdGroupEvidenceFSTS html
get_example_fMRI_data html
get_example_fMRI_data_group html
mask html
plot.fMRI_single_evidence html
print.fMRI_group_evidence html
print.fMRI_group_single_voxel html
print.fMRI_single_evidence html
print.fMRI_single_voxel html
summary.fMRI_group_evidence html
summary.fMRI_single_evidence html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘BayesDLMfMRI’ as ‘BayesDLMfMRI_0.0.3_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (BayesDLMfMRI)