* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘BIGr’ ...
** this is package ‘BIGr’ version ‘0.6.2’
** package ‘BIGr’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘BIGr’
    finding HTML links ... done
    allele_freq_poly                        html  
    calculate_Het                           html  
    calculate_MAF                           html  
    check_homozygous_trios                  html  
    check_ped                               html  
    check_replicates                        html  
    dosage2vcf                              html  
    dosage_ratios                           html  
    filterMADC                              html  
    filterVCF                               html  
    flip_dosage                             html  
    get_countsMADC                          html  
    imputation_concordance                  html  
    madc2gmat                               html  
    madc2vcf_all                            html  
    madc2vcf_targets                        html  
    merge_MADCs                             html  
    solve_composition_poly                  html  
    thinSNP                                 html  
    updog2vcf                               html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BIGr)