* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘ArchaeoPhases’ ... ** this is package ‘ArchaeoPhases’ version ‘2.0’ ** package ‘ArchaeoPhases’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘ArchaeoPhases’ finding HTML links ... done ActivityEvents-class html Rd warning: ActivityEvents-class.Rd:19: missing link ‘TimeSeries-class’ AgeDepthModel-class html ArchaeoPhases-defunct html ArchaeoPhases-deprecated html ArchaeoPhases-package html Rd warning: ArchaeoPhases-package.Rd:25: missing link ‘TimeScale-class’ CumulativeEvents-class html Rd warning: CumulativeEvents-class.Rd:35: missing link ‘TimeSeries-class’ DurationsMCMC-class html EventsMCMC-class html MCMC-class html OccurrenceEvents-class html PhasesMCMC-class html TimeRange-class html activity html Rd warning: activity.Rd:53: missing link ‘TimeScale-class’ allen_analyze html allen_complement html allen_composition html allen_converse html allen_illustrate html allen_intersect html allen_joint_concurrency html allen_observe html allen_observe_frequency html allen_relation html allen_relation_code html allen_union html as_coda html as_events html Rd warning: as_events.Rd:22: missing link ‘TimeScale-class’ as_phases html Rd warning: as_phases.Rd:36: missing link ‘TimeScale-class’ bind html boundaries html bury html Rd warning: bury.Rd:50: missing link ‘TimeScale-class’ check html data.frame html Rd warning: data.frame.Rd:25: missing link ‘TimeScale-class’ duration html elapse html hiatus html interpolate html interval_credible html Rd warning: interval_credible.Rd:25: missing link ‘TimeScale-class’ interval_hdr html Rd warning: interval_hdr.Rd:28: missing link ‘TimeScale-class’ mcmc_events html mcmc_phases html names html occurrence html Rd warning: occurrence.Rd:39: missing link ‘TimeScale-class’ older html phases html plot_events html Rd warning: plot_events.Rd:32: missing link ‘TimeScale-class’ plot_phases html Rd warning: plot_phases.Rd:35: missing link ‘TimeScale-class’ read_bcal html Rd warning: read_bcal.Rd:42: missing link ‘TimeScale-class’ read_chronomodel html Rd warning: read_chronomodel.Rd:47: missing link ‘TimeScale-class’ read_oxcal html Rd warning: read_oxcal.Rd:38: missing link ‘TimeScale-class’ reexports html sensitivity html sort html sort.list html subset html summary html Rd warning: summary.Rd:19: missing link ‘TimeScale-class’ tempo html Rd warning: tempo.Rd:49: missing link ‘TimeScale-class’ transition html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ArchaeoPhases)