• using R version 4.4.3 (2025-02-28 ucrt)
• using platform: x86_64-w64-mingw32
• R was compiled by     gcc.exe (GCC) 13.3.0     GNU Fortran (GCC) 13.3.0
• running under: Windows Server 2022 x64 (build 20348)
• using session charset: UTF-8
• checking for file 'voluModel/DESCRIPTION' ... OK
• this is package 'voluModel' version '0.2.3'
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking whether package 'voluModel' can be installed ... OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking 'build' directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [11s] OK
• checking whether the package can be loaded with stated dependencies ... [11s] OK
• checking whether the package can be unloaded cleanly ... [10s] OK
• checking whether the namespace can be loaded with stated dependencies ... [10s] OK
• checking whether the namespace can be unloaded cleanly ... [10s] OK
• checking loading without being on the library search path ... [11s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [27s] OK
• checking Rd files ... [1s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from 'inst/doc' ... OK
• checking files in 'vignettes' ... OK
• checking examples ... [15s] ERROR Running examples in 'voluModel-Ex.R' failed The error most likely occurred in: > ### Name: diversityStack > ### Title: Diversity stack > ### Aliases: diversityStack > ### Keywords: plotting > > ### ** Examples > > library(terra) terra 1.8.86 > rast1 <- rast(ncol=10, nrow=10) > values(rast1) <- rep(0:1, 50) > > rast2 <- rast(ncol=10, nrow=10) > values(rast2) <- c(rep(0, 50), rep(1,50)) > > rastList <- list(rast1, rast2) > result <- diversityStack(rasterList = rastList, + template = rast2) Warning: PROJ: proj_create: no database context specified (GDAL error 1) Warning: PROJ: proj_create: no database context specified (GDAL error 1) Warning: PROJ: proj_create: no database context specified (GDAL error 1)
• checking for unstated dependencies in 'tests' ... OK
• checking tests ... [25s] ERROR   Running 'testthat.R' [24s] Running the tests in 'tests/testthat.R' failed. Complete output:   > library(testthat)   > library(voluModel)   >   > test_check("voluModel")   terra 1.8.86      Attaching package: 'terra'      The following objects are masked from 'package:testthat':          compare, describe      Could not parse    spam, eggs, NA    into x and/or y coordinates.   Using longitude and latitude    as x and y coordinates, respectively.   Could not parse    spam, eggs, cheese    into x and/or y coordinates.   Using longitude, latitude, and depth    as x, y, and z coordinates, respectively.      Input SpatRaster vector names inappropriate:   a, b, c   Names must follow the format 'X' followed by a number corresponding to the starting depth of the layer.   Could not parse        into x and/or y coordinates.   Could not parse        into x and/or y coordinates.   Could not parse    cheese, eggs, NA    into x and/or y coordinates.   Could not parse    longitude, longitude, NA    into x and/or y coordinates.   Could not parse    latitude, latitude, NA    into x and/or y coordinates.   Could not parse    yak, yak, yak    into x and/or y coordinates.   Could not parse    xebu, xebu, xebu    into x and/or y coordinates.   Could not parse    xebu, xebu, xebu    into x and/or y coordinates.   Could not parse    xebu, xebu, xebu    into x and/or y coordinates.   Could not parse    xebu, xebu, xebu    into x and/or y coordinates.   Could not parse    cheese, eggs, spam    into x and/or y coordinates.   Could not parse    longitude, longitude, depth    into x and/or y coordinates.   Could not parse    latitude, latitude, depth    into x and/or y coordinates.   Could not parse    longitude, depth, depth    into x and/or y coordinates.   Could not parse    y, yum, X    into x, y, and/or z coordinates.   Could not parse    x, exlax, depth    into x and/or y coordinates.   Could not parse    z, z, sneeze    into x and/or y coordinates.   Could not parse    z, z, sneeze    into x and/or y coordinates.   Argument 'verbose' is not of type 'logical'.      Could not parse    spam, eggs    into x and/or y coordinates.   Using longitude and latitude    as x and y coordinates, respectively.   Using longitude and latitude    as x and y coordinates, respectively.   Loading required package: spam   Spam version 2.11-1 (2025-01-20) is loaded.   Type 'help( Spam)' or 'demo( spam)' for a short introduction   and overview of this package.   Help for individual functions is also obtained by adding the   suffix '.spam' to the function name, e.g. 'help( chol.spam)'.      Attaching package: 'spam'      The following objects are masked from 'package:base':          backsolve, forwardsolve      Loading required package: viridisLite   Loading required package: RColorBrewer      Try help(fields) to get started.      Attaching package: 'fields'      The following object is masked from 'package:terra':          describe      The following object is masked from 'package:testthat':          describe      Could not parse    eggs, spam, NA, NA, NA, NA, NA, NA, NA, NA, NA, NA    into x and/or y coordinates.   Argument 'clipToOcean' is not of type 'logical'.      Argument 'clipToOcean' is not of type 'logical'.      Argument 'clipToOcean' is not of type 'logical'.      Argument 'clipToOcean' is not of type 'logical'.      Argument 'clipToOcean' is not of type 'logical'.      Argument 'clipToOcean' is not of type 'logical'.      Argument 'clipToOcean' is not of type 'logical'.      Argument 'clipToOcean' is not of type 'logical'.         Attaching package: 'dplyr'      The following objects are masked from 'package:terra':          intersect, union      The following objects are masked from 'package:stats':          filter, lag      The following objects are masked from 'package:base':          intersect, setdiff, setequal, union      Using longitude, latitude, and depth    as x, y, and z coordinates, respectively.   Using longitude, latitude, and depth    as x, y, and z coordinates, respectively.   Could not parse    scientificName, decimalLongitude    into x and/or y coordinates.   Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   Argument 'verbose' is not of type 'logical'.      Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   Could not parse    scientificName, decimalLongitude    into x and/or y coordinates.   First set of occurrences: Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   Could not parse    scientificName, decimalLongitude    into x and/or y coordinates.   Argument 'verbose' is not of type 'logical'.      First set of occurrences: Using decimalLongitude and y    as x and y coordinates, respectively.   Second set of occurrences: Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   First set of occurrences: Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   Second set of occurrences: Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   First set of occurrences: Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   Second set of occurrences: Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   First set of occurrences: Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   Second set of occurrences: Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   First set of occurrences: Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   Second set of occurrences: Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   First set of occurrences: Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   Second set of occurrences: Using decimalLongitude and decimalLatitude    as x and y coordinates, respectively.   'rast2' was null. Replaced with blank raster.   'rast1' was null. Replaced with blank raster.   Both 'rast1' and 'rast2' were null.   They were replaced with blank rasters.   'rast2' was null. Replaced with blank raster.   'rast1' was null. Replaced with blank raster.   Both 'rast1' and 'rast2' were null.   They were replaced with blank rasters.
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [281s] OK
• checking PDF version of manual ... [23s] OK
• checking HTML version of manual ... [5s] OK
• DONE

Status: 2 ERRORs