* installing *source* package 'vegan' ... ** package 'vegan' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc.exe (GCC) 12.3.0' using Fortran compiler: 'GNU Fortran (GCC) 12.3.0' make[1]: Entering directory '/d/temp/RtmpC0ENO2/R.INSTALL553472c079ff/vegan/src' gcc -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c data2hill.c -o data2hill.o gfortran -pedantic -O2 -mfpmath=sse -msse2 -mstackrealign -c decorana.f -o decorana.o gcc -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c getF.c -o getF.o getF.c: In function 'do_getF': getF.c:335:13: warning: 'resid' may be used uninitialized [-Wmaybe-uninitialized] 335 | double *resid; | ^~~~~ getF.c:446:22: warning: 'qrwork' may be used uninitialized [-Wmaybe-uninitialized] 446 | F77_CALL(dqrdc2)(qr, &nr, &nr, &nx, &qrtol, &qrank, | ^~~~~~ getF.c:347:45: note: 'qrwork' was declared here 347 | double *wperm, *Xorig, *Zorig, *Zperm, *qrwork, *zqrwork, qrtol=1e-7; | ^~~~~~ getF.c:347:37: warning: 'Zperm' may be used uninitialized [-Wmaybe-uninitialized] 347 | double *wperm, *Xorig, *Zorig, *Zperm, *qrwork, *zqrwork, qrtol=1e-7; | ^~~~~ getF.c:347:29: warning: 'Zorig' may be used uninitialized [-Wmaybe-uninitialized] 347 | double *wperm, *Xorig, *Zorig, *Zperm, *qrwork, *zqrwork, qrtol=1e-7; | ^~~~~ getF.c:436:13: warning: 'Xorig' may be used uninitialized [-Wmaybe-uninitialized] 436 | wcentre(Xorig, qr, wperm, &nr, &nx); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ getF.c:347:21: note: 'Xorig' was declared here 347 | double *wperm, *Xorig, *Zorig, *Zperm, *qrwork, *zqrwork, qrtol=1e-7; | ^~~~~ getF.c:436:13: warning: 'wperm' may be used uninitialized [-Wmaybe-uninitialized] 436 | wcentre(Xorig, qr, wperm, &nr, &nx); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ getF.c:347:13: note: 'wperm' was declared here 347 | double *wperm, *Xorig, *Zorig, *Zperm, *qrwork, *zqrwork, qrtol=1e-7; | ^~~~~ gcc -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c goffactor.c -o goffactor.o gcc -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c init.c -o init.o gfortran -pedantic -O2 -mfpmath=sse -msse2 -mstackrealign -c monoMDS.f -o monoMDS.o gcc -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c nestedness.c -o nestedness.o gfortran -pedantic -O2 -mfpmath=sse -msse2 -mstackrealign -c ordering.f -o ordering.o gcc -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c pnpoly.c -o pnpoly.o gcc -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c stepacross.c -o stepacross.o gcc -I"D:/RCompile/recent/R-4.3.3/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c vegdist.c -o vegdist.o gcc -shared -s -static-libgcc -o vegan.dll tmp.def data2hill.o decorana.o getF.o goffactor.o init.o monoMDS.o nestedness.o ordering.o pnpoly.o stepacross.o vegdist.o -LD:/RCompile/recent/R-4.3.3/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.3.3/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib -lgfortran -lm -lquadmath -LD:/RCompile/recent/R-4.3.3/bin/x64 -lR make[1]: Leaving directory '/d/temp/RtmpC0ENO2/R.INSTALL553472c079ff/vegan/src' make[1]: Entering directory '/d/temp/RtmpC0ENO2/R.INSTALL553472c079ff/vegan/src' make[1]: Leaving directory '/d/temp/RtmpC0ENO2/R.INSTALL553472c079ff/vegan/src' installing to d:/Rcompile/CRANpkg/lib/4.3/00LOCK-vegan/00new/vegan/libs/x64 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'vegan' as vegan_2.6-6.1.zip * DONE (vegan)