- using R version 4.4.3 (2025-02-28 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 13.3.0
GNU Fortran (GCC) 13.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'sigugr/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'sigugr' version '1.0.0'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'sigugr' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s] OK
- checking whether the package can be unloaded cleanly ... [0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s] OK
- checking loading without being on the library search path ... [0s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [4s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [14s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [18s] ERROR
Running 'testthat.R' [18s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(sigugr)
>
> test_check("sigugr")
writing: substituting ENGCRS["Undefined Cartesian SRS with unknown unit"] for missing CRS
Saving _problems/test-clip_raster-32.R
Saving _problems/test-clip_raster-50.R
No encoding supplied: defaulting to UTF-8.
No encoding supplied: defaulting to UTF-8.
Fetching all vector layers from the database...
Fetching all vector layers from the database...
No encoding supplied: defaulting to UTF-8.
writing: substituting ENGCRS["Undefined Cartesian SRS with unknown unit"] for missing CRS
writing: substituting ENGCRS["Undefined Cartesian SRS with unknown unit"] for missing CRS
[ FAIL 2 | WARN 22 | SKIP 0 | PASS 197 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-clip_raster.R:30:3'): clip_raster handles valid inputs correctly ──
Error: [rast] empty srs
Backtrace:
▆
1. ├─terra::rast(...) at test-clip_raster.R:30:3
2. └─terra::rast(...)
3. └─terra (local) .local(x = x, ...)
4. └─terra:::new_rast(...)
5. └─terra:::messages(r, "rast")
6. └─terra:::error(f, x@pntr$getError())
── Error ('test-clip_raster.R:48:3'): clip_raster projects raster if CRS differs ──
Error: [rast] empty srs
Backtrace:
▆
1. ├─terra::rast(...) at test-clip_raster.R:48:3
2. └─terra::rast(...)
3. └─terra (local) .local(x = x, ...)
4. └─terra:::new_rast(...)
5. └─terra:::messages(r, "rast")
6. └─terra:::error(f, x@pntr$getError())
[ FAIL 2 | WARN 22 | SKIP 0 | PASS 197 ]
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [13s] ERROR
Error(s) in re-building vignettes:
--- re-building 'sigugr.Rmd' using rmarkdown
Quitting from sigugr.Rmd:135-139 [clip]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! OGRCreateCoordinateTransformation(): transformation not available
---
Backtrace:
▆
1. └─sigugr::clip_raster(mdt, bbox, keep_crs = FALSE)
2. ├─sf::st_transform(polygon_bbox, terra::crs(raster))
3. └─sf:::st_transform.sf(polygon_bbox, terra::crs(raster))
4. ├─sf::st_transform(st_geometry(x), crs, ...)
5. └─sf:::st_transform.sfc(st_geometry(x), crs, ...)
6. ├─sf::st_sfc(...)
7. ├─base::structure(...)
8. └─sf:::CPL_transform(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'sigugr.Rmd' failed with diagnostics:
OGRCreateCoordinateTransformation(): transformation not available
--- failed re-building 'sigugr.Rmd'
SUMMARY: processing the following file failed:
'sigugr.Rmd'
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [18s] OK
- checking HTML version of manual ... [3s] OK
- DONE
Status: 2 ERRORs