- using R version 4.4.3 Patched (2026-02-12 r89426 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 13.3.0
GNU Fortran (GCC) 13.3.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'rsurv/DESCRIPTION' ... OK
- this is package 'rsurv' version '0.0.2'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'rsurv' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [5s] OK
- checking whether the package can be loaded with stated dependencies ... [4s] OK
- checking whether the package can be unloaded cleanly ... [4s] OK
- checking whether the namespace can be loaded with stated dependencies ... [4s] OK
- checking whether the namespace can be unloaded cleanly ... [4s] OK
- checking loading without being on the library search path ... [9s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [11s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [14s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [12s] ERROR
Running 'testthat.R' [12s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(rsurv)
>
> test_check("rsurv")
Saving _problems/test2-12.R
[ FAIL 1 | WARN 0 | SKIP 4 | PASS 0 ]
══ Skipped tests (4) ═══════════════════════════════════════════════════════════
• empty test (4): , , ,
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test2.R:5:1'): (code run outside of `test_that()`) ──────────────────
<dplyr:::mutate_error/rlang_error/error/condition>
Error in `mutate(data.frame(age = rnorm(n), sex = sample(c("f", "m"), size = n, replace = TRUE)), time = rphreg(u = runif(n), ~age + sex, beta = c(1, 0.5), dist = "weibull", scale = 2, shape = 1.5), rinterval(time, tau = seq(0, 5, by = 1), type = "II", prob = 0.7))`: i In argument: `rinterval(time, tau = seq(0, 5, by = 1), type = "II", prob = 0.7)`.
Caused by error in `rinterval()`:
! object 'limits' not found
Backtrace:
▆
1. ├─dplyr::mutate(...) at test2.R:5:1
2. ├─dplyr:::mutate.data.frame(...)
3. │ └─dplyr:::mutate_cols(.data, dplyr_quosures(...), by)
4. │ ├─base::withCallingHandlers(...)
5. │ └─dplyr:::mutate_col(dots[[i]], data, mask, new_columns)
6. │ └─mask$eval_all_mutate(quo)
7. │ └─dplyr (local) eval()
8. ├─rsurv::rinterval(...)
9. └─base::.handleSimpleError(...)
10. └─dplyr (local) h(simpleError(msg, call))
11. └─rlang::abort(message, class = error_class, parent = parent, call = error_call)
[ FAIL 1 | WARN 0 | SKIP 4 | PASS 0 ]
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [13s] OK
- checking PDF version of manual ... [17s] OK
- checking HTML version of manual ... [2s] OK
- DONE
Status: 1 ERROR