Check results for 'rmdcev'

using R version 4.2.3 (2023-03-15 ucrt)
using platform: x86_64-w64-mingw32 (64-bit)
using session charset: UTF-8
checking for file 'rmdcev/DESCRIPTION' ... OK
checking extension type ... Package
this is package 'rmdcev' version '1.2.5'
package encoding: UTF-8
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for hidden files and directories ... OK
checking for portable file names ... OK
checking whether package 'rmdcev' can be installed ... OK
See the install log for details.
checking installed package size ... OK
checking package directory ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking R files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... OK
checking whether the package can be loaded with stated dependencies ... OK
checking whether the package can be unloaded cleanly ... OK
checking whether the namespace can be loaded with stated dependencies ... OK
checking whether the namespace can be unloaded cleanly ... OK
checking loading without being on the library search path ... OK
checking use of S3 registration ... OK
checking dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... [23s] OK
checking Rd files ... [1s] OK
checking Rd metadata ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking contents of 'data' directory ... OK
checking data for non-ASCII characters ... OK
checking LazyData ... OK
checking data for ASCII and uncompressed saves ... OK
checking line endings in shell scripts ... OK
checking line endings in C/C++/Fortran sources/headers ... OK
checking line endings in Makefiles ... OK
checking compilation flags in Makevars ... OK
checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.
checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
checking use of PKG_*FLAGS in Makefiles ... OK
checking pragmas in C/C++ headers and code ... OK
checking compiled code ... OK
checking examples ... [9s] OK
checking for unstated dependencies in 'tests' ... OK
checking tests ... [106s] ERROR
  Running 'testthat.R' [106s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > Sys.setenv("R_TESTS" = "")
  >
  > library(testthat)
  > library(rmdcev)
  Loading required package: Rcpp
  This is rmdcev version 1.2.5
  > test_check("rmdcev")

  SAMPLING FOR MODEL 'mdcev' NOW (CHAIN 1).
  Chain 1:
  Chain 1: Gradient evaluation took 0.006812 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 68.12 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1:
  Chain 1:
  Chain 1: WARNING: No variance estimation is
  Chain 1: performed for num_warmup < 20
  Chain 1:
  Chain 1: Iteration: 1 / 10 [ 10%] (Warmup)
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  Chain 1: Iteration: 10 / 10 [100%] (Sampling)
  Chain 1:
  Chain 1: Elapsed Time: 0.102 seconds (Warm-up)
  Chain 1: 0.032 seconds (Sampling)
  Chain 1: 0.134 seconds (Total)
  Chain 1:

  SAMPLING FOR MODEL 'mdcev' NOW (CHAIN 1).
  Chain 1:
  Chain 1: Gradient evaluation took 0.002386 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 23.86 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1:
  Chain 1:
  Chain 1: WARNING: No variance estimation is
  Chain 1: performed for num_warmup < 20
  Chain 1:
  Chain 1: Iteration: 1 / 10 [ 10%] (Warmup)
  Chain 1: Iteration: 2 / 10 [ 20%] (Warmup)
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  Chain 1: Iteration: 9 / 10 [ 90%] (Sampling)
  Chain 1: Iteration: 10 / 10 [100%] (Sampling)
  Chain 1:
  Chain 1: Elapsed Time: 0.026 seconds (Warm-up)
  Chain 1: 0.033 seconds (Sampling)
  Chain 1: 0.059 seconds (Total)
  Chain 1:

  SAMPLING FOR MODEL 'mdcev_rp' NOW (CHAIN 1).
  Chain 1:
  Chain 1: Gradient evaluation took 0.004165 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 41.65 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1:
  Chain 1:
  Chain 1: WARNING: No variance estimation is
  Chain 1: performed for num_warmup < 20
  Chain 1:
  Chain 1: Iteration: 1 / 10 [ 10%] (Warmup)
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  Chain 1: Iteration: 6 / 10 [ 60%] (Sampling)
  Chain 1: Iteration: 7 / 10 [ 70%] (Sampling)
  Chain 1: Iteration: 8 / 10 [ 80%] (Sampling)
  Chain 1: Iteration: 9 / 10 [ 90%] (Sampling)
  Chain 1: Iteration: 10 / 10 [100%] (Sampling)
  Chain 1:
  Chain 1: Elapsed Time: 1.929 seconds (Warm-up)
  Chain 1: 0.139 seconds (Sampling)
  Chain 1: 2.068 seconds (Total)
  Chain 1:

  SAMPLING FOR MODEL 'mdcev_rp' NOW (CHAIN 1).
  Chain 1: Rejecting initial value:
  Chain 1: Log probability evaluates to log(0), i.e. negative infinity.
  Chain 1: Stan can't start sampling from this initial value.
  Chain 1:
  Chain 1: Gradient evaluation took 0.003491 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 34.91 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1:
  Chain 1:
  Chain 1: WARNING: No variance estimation is
  Chain 1: performed for num_warmup < 20
  Chain 1:
  Chain 1: Iteration: 1 / 10 [ 10%] (Warmup)
  Chain 1: Iteration: 2 / 10 [ 20%] (Warmup)
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  Chain 1: Iteration: 10 / 10 [100%] (Sampling)
  Chain 1:
  Chain 1: Elapsed Time: 0.349 seconds (Warm-up)
  Chain 1: 0.121 seconds (Sampling)
  Chain 1: 0.47 seconds (Total)
  Chain 1:

  SAMPLING FOR MODEL 'mdcev_rp' NOW (CHAIN 1).
  Chain 1:
  Chain 1: Gradient evaluation took 0.003624 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 36.24 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1:
  Chain 1:
  Chain 1: WARNING: No variance estimation is
  Chain 1: performed for num_warmup < 20
  Chain 1:
  Chain 1: Iteration: 1 / 10 [ 10%] (Warmup)
  Chain 1: Iteration: 2 / 10 [ 20%] (Warmup)
  Chain 1: Iteration: 3 / 10 [ 30%] (Warmup)
  Chain 1: Iteration: 4 / 10 [ 40%] (Warmup)
  Chain 1: Iteration: 5 / 10 [ 50%] (Warmup)
  Chain 1: Iteration: 6 / 10 [ 60%] (Sampling)
  Chain 1: Iteration: 7 / 10 [ 70%] (Sampling)
  Chain 1: Iteration: 8 / 10 [ 80%] (Sampling)
  Chain 1: Iteration: 9 / 10 [ 90%] (Sampling)
  Chain 1: Iteration: 10 / 10 [100%] (Sampling)
  Chain 1:
  Chain 1: Elapsed Time: 0.81 seconds (Warm-up)
  Chain 1: 0.044 seconds (Sampling)
  Chain 1: 0.854 seconds (Total)
  Chain 1:

  SAMPLING FOR MODEL 'mdcev' NOW (CHAIN 1).
  Chain 1:
  Chain 1: Gradient evaluation took 0.002763 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 27.63 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1:
  Chain 1:
  Chain 1: WARNING: No variance estimation is
  Chain 1: performed for num_warmup < 20
  Chain 1:
  Chain 1: Iteration: 1 / 10 [ 10%] (Warmup)
  Chain 1: Iteration: 2 / 10 [ 20%] (Warmup)
  Chain 1: Iteration: 3 / 10 [ 30%] (Warmup)
  Chain 1: Iteration: 4 / 10 [ 40%] (Warmup)
  Chain 1: Iteration: 5 / 10 [ 50%] (Warmup)
  Chain 1: Iteration: 6 / 10 [ 60%] (Sampling)
  Chain 1: Iteration: 7 / 10 [ 70%] (Sampling)
  Chain 1: Iteration: 8 / 10 [ 80%] (Sampling)
  Chain 1: Iteration: 9 / 10 [ 90%] (Sampling)
  Chain 1: Iteration: 10 / 10 [100%] (Sampling)
  Chain 1:
  Chain 1: Elapsed Time: 0.044 seconds (Warm-up)
  Chain 1: 0.018 seconds (Sampling)
  Chain 1: 0.062 seconds (Total)
  Chain 1:

  SAMPLING FOR MODEL 'mdcev_rp' NOW (CHAIN 1).
  Chain 1:
  Chain 1: Gradient evaluation took 0.003085 seconds
  Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 30.85 seconds.
  Chain 1: Adjust your expectations accordingly!
  Chain 1:
  Chain 1:
  Chain 1: WARNING: No variance estimation is
  Chain 1: performed for num_warmup < 20
  Chain 1:
  Chain 1: Iteration: 1 / 10 [ 10%] (Warmup)
  Chain 1: Iteration: 2 / 10 [ 20%] (Warmup)
  Chain 1: Iteration: 3 / 10 [ 30%] (Warmup)
  Chain 1: Iteration: 4 / 10 [ 40%] (Warmup)
  Chain 1: Iteration: 5 / 10 [ 50%] (Warmup)
  Chain 1: Iteration: 6 / 10 [ 60%] (Sampling)
  Chain 1: Iteration: 7 / 10 [ 70%] (Sampling)
  Chain 1: Iteration: 8 / 10 [ 80%] (Sampling)
  Chain 1: Iteration: 9 / 10 [ 90%] (Sampling)
  Chain 1: Iteration: 10 / 10 [100%] (Sampling)
  Chain 1:
  Chain 1: Elapsed Time: 0.028 seconds (Warm-up)
  Chain 1: 0.027 seconds (Sampling)
  Chain 1: 0.055 seconds (Total)
  Chain 1:
  [1] -2653.237036
  [1] 5467.655028
  [1] -2770.001936
  [1] 253.1987599
               [,1]
  [1,] -375.0261844
  [1] -5073.714415
   [1] 39 0 2 0 0 45 0 279 0 0 0 0 0 0 0 0 0
  [1] 0.6943688388
  [1] 29.77485721
              [,1]
  [1,] -41.6783403
              [,1]
  [1,] -41.6783403
  [ FAIL 1 | WARN 62 | SKIP 2 | PASS 84 ]

  ══ Skipped tests (2) ═══════════════════════════════════════════════════════════
  • empty test (2): 'test-data.R:24:1', 'test-kt_ee.R:253:1'

  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-simulations.R:211:2'): Conditional error hybrid draw ─────────
  abs(util - 29.58674801) < tol is not TRUE

  `actual`: FALSE
  `expected`: TRUE

  [ FAIL 1 | WARN 62 | SKIP 2 | PASS 84 ]
  Error: Test failures
  Execution halted
checking PDF version of manual ... OK
DONE

Status: 1 ERROR, 1 NOTE